Information for 4-ACTAATCTGAGAT (Motif 6)

C G T A A G T C A C G T C T G A C G T A A C G T A G T C A C G T A C T G G C T A C T A G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G A T A G T C C G T A A C T G C G T A A C G T A G C T C G T A A C T G A C G T
p-value:1e-11
log p-value:-2.752e+01
Information Content per bp:1.946
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.6 +/- 19.5bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACTAATCTGAGAT
-YTAATCCY----
 C G T A A G T C A C G T C T G A C G T A A C G T A G T C A C G T A C T G G C T A C T A G C G T A A C G T
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACTAATCTGAGAT
CCTAATCCGC---
 C G T A A G T C A C G T C T G A C G T A A C G T A G T C A C G T A C T G G C T A C T A G C G T A A C G T
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACTAATCTGAGAT
-TTAATCCG----
 C G T A A G T C A C G T C T G A C G T A A C G T A G T C A C G T A C T G G C T A C T A G C G T A A C G T
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACTAATCTGAGAT
GCTAATCC-----
 C G T A A G T C A C G T C T G A C G T A A C G T A G T C A C G T A C T G G C T A C T A G C G T A A C G T
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACTAATCTGAGAT
-TTAATCCT----
 C G T A A G T C A C G T C T G A C G T A A C G T A G T C A C G T A C T G G C T A C T A G C G T A A C G T
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACTAATCTGAGAT
GCTAATCCCC---
 C G T A A G T C A C G T C T G A C G T A A C G T A G T C A C G T A C T G G C T A C T A G C G T A A C G T
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACTAATCTGAGAT
NCCTTATCTG----
 A C G T C G T A A G T C A C G T C T G A C G T A A C G T A G T C A C G T A C T G G C T A C T A G C G T A A C G T
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACTAATCTGAGAT---
GANTATTATGGGATGGA
 A C G T C G T A A G T C A C G T C T G A C G T A A C G T A G T C A C G T A C T G G C T A C T A G C G T A A C G T A C G T A C G T A C G T
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACTAATCTGAGAT
NNCTTATCTN----
 A C G T C G T A A G T C A C G T C T G A C G T A A C G T A G T C A C G T A C T G G C T A C T A G C G T A A C G T
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T A C G T A C G T A C G T

PH0034.1_Gbx2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACTAATCTGAGAT-
AGCGCTAATTAGCGATT
 A C G T A C G T A C G T C G T A A G T C A C G T C T G A C G T A A C G T A G T C A C G T A C T G G C T A C T A G C G T A A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T