Information for 1-KCCWTGGGCAGCA (Motif 3)

A C G T A G T C G A T C C G A T C A G T C T A G C T A G A C T G A T G C C G T A A C T G A G T C C G T A
Reverse Opposite:
C G A T T A C G G T A C C G A T T A C G G T A C G A T C A G T C G T C A C G T A C T A G T C A G G T C A
p-value:1e-13
log p-value:-3.074e+01
Information Content per bp:1.692
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif120.1
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets38.6 +/- 23.1bp
Average Position of motif in Background51.4 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-KCCWTGGGCAGCA--
NNNNTTGGGCACNNCN
 A C G T A C G T A G T C G A T C C G A T C A G T C T A G C T A G A C T G A T G C C G T A A C T G A G T C C G T A A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:KCCWTGGGCAGCA
--NGTGGGCAT--
 A C G T A G T C G A T C C G A T C A G T C T A G C T A G A C T G A T G C C G T A A C T G A G T C C G T A
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-KCCWTGGGCAGCA
NGCCTGAGGCN---
 A C G T A C G T A G T C G A T C C G A T C A G T C T A G C T A G A C T G A T G C C G T A A C T G A G T C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-KCCWTGGGCAGCA
TGCCTGAGGCN---
 A C G T A C G T A G T C G A T C C G A T C A G T C T A G C T A G A C T G A T G C C G T A A C T G A G T C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-KCCWTGGGCAGCA
NGCCTNAGGCN---
 A C G T A C G T A G T C G A T C C G A T C A G T C T A G C T A G A C T G A T G C C G T A A C T G A G T C C G T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:KCCWTGGGCAGCA
--TNNGGGCAG--
 A C G T A G T C G A T C C G A T C A G T C T A G C T A G A C T G A T G C C G T A A C T G A G T C C G T A
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--KCCWTGGGCAGCA-
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A G T C G A T C C G A T C A G T C T A G C T A G A C T G A T G C C G T A A C T G A G T C C G T A A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:KCCWTGGGCAGCA
WDNCTGGGCA---
 A C G T A G T C G A T C C G A T C A G T C T A G C T A G A C T G A T G C C G T A A C T G A G T C C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KCCWTGGGCAGCA
-CAAAGGTCAG--
 A C G T A G T C G A T C C G A T C A G T C T A G C T A G A C T G A T G C C G T A A C T G A G T C C G T A
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:KCCWTGGGCAGCA---
------GGGAGGACNG
 A C G T A G T C G A T C C G A T C A G T C T A G C T A G A C T G A T G C C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G