Information for 7-RTTATTARAAYTAATA (Motif 24)

T C A G C G A T A G C T C G T A A C G T A C G T C G T A C T A G C G T A G C T A A G C T A C G T G T C A C G T A A G C T C G T A
Reverse Opposite:
C G A T C T G A A C G T A C G T C G T A T C G A C G A T G C A T A G T C C G A T G T C A C G T A A C G T C T G A G C T A A G C T
p-value:1e-8
log p-value:-1.887e+01
Information Content per bp:1.732
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif35.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets41.4 +/- 18.0bp
Average Position of motif in Background47.0 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:forward strand
Alignment:RTTATTARAAYTAATA--
-------ATATTAATTAA
 T C A G C G A T A G C T C G T A A C G T A C G T C G T A C T A G C G T A G C T A A G C T A C G T G T C A C G T A A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-RTTATTARAAYTAATA
CCGTATTATAAACAA--
 A C G T T C A G C G A T A G C T C G T A A C G T A C G T C G T A C T A G C G T A G C T A A G C T A C G T G T C A C G T A A G C T C G T A
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-RTTATTARAAYTAATA
NNTAATTATAATTNNN-
 A C G T T C A G C G A T A G C T C G T A A C G T A C G T C G T A C T A G C G T A G C T A A G C T A C G T G T C A C G T A A G C T C G T A
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C A C G T

GSX2/MA0893.1/Jaspar

Match Rank:4
Score:0.58
Offset:9
Orientation:reverse strand
Alignment:RTTATTARAAYTAATA---
---------NTTAATTAGN
 T C A G C G A T A G C T C G T A A C G T A C G T C G T A C T A G C G T A G C T A A G C T A C G T G T C A C G T A A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

GSX1/MA0892.1/Jaspar

Match Rank:5
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:RTTATTARAAYTAATA---
---------NNTAATTAGN
 T C A G C G A T A G C T C G T A A C G T A C G T C G T A C T A G C G T A G C T A A G C T A C G T G T C A C G T A A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T G C A T C G T A C G T A A G C T C A G T C T G A T A C G C A T G

PB0069.1_Sox21_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RTTATTARAAYTAATA
TTTAATTATAATTAAG-
 A C G T T C A G C G A T A G C T C G T A A C G T A C G T C G T A C T A G C G T A G C T A A G C T A C G T G T C A C G T A A G C T C G T A
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:RTTATTARAAYTAATA
---------TTTAAT-
 T C A G C G A T A G C T C G T A A C G T A C G T C G T A C T A G C G T A G C T A A G C T A C G T G T C A C G T A A G C T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:8
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:RTTATTARAAYTAATA--
----------TTAATTAN
 T C A G C G A T A G C T C G T A A C G T A C G T C G T A C T A G C G T A G C T A A G C T A C G T G T C A C G T A A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

HOXB3/MA0903.1/Jaspar

Match Rank:9
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:RTTATTARAAYTAATA---
---------NNTAATTANN
 T C A G C G A T A G C T C G T A A C G T A C G T C G T A C T A G C G T A G C T A A G C T A C G T G T C A C G T A A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

SHOX/MA0630.1/Jaspar

Match Rank:10
Score:0.56
Offset:10
Orientation:forward strand
Alignment:RTTATTARAAYTAATA--
----------TTAATTGG
 T C A G C G A T A G C T C G T A A C G T A C G T C G T A C T A G C G T A G C T A A G C T A C G T G T C A C G T A A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G