Information for 5-CAAAATAATG (Motif 19)

G T A C G T C A C T G A C T G A C G T A A C G T G T C A G T C A C G A T T C A G
Reverse Opposite:
A G T C C G T A C A G T C A G T C G T A A C G T A G C T A G C T C A G T A C T G
p-value:1e-8
log p-value:-2.030e+01
Information Content per bp:1.771
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif5.45%
Number of Background Sequences with motif709.3
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets39.0 +/- 27.9bp
Average Position of motif in Background48.7 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAAAATAATG--
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A C T G A C T G A C G T A A C G T G T C A G T C A C G A T T C A G A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAAAATAATG---
NNCTNAATTATGANN
 A C G T A C G T G T A C G T C A C T G A C T G A C G T A A C G T G T C A G T C A C G A T T C A G A C G T A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAAATAATG-
-AAAACAATGG
 G T A C G T C A C T G A C T G A C G T A A C G T G T C A G T C A C G A T T C A G A C G T
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CAAAATAATG
CAATTGCAAAAATAT-
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T C A C T G A C T G A C G T A A C G T G T C A G T C A C G A T T C A G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAAAATAATG
---AATAATT
 G T A C G T C A C T G A C T G A C G T A A C G T G T C A G T C A C G A T T C A G
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAAATAATG-------
AAACATAATGAGGTTGC
 G T A C G T C A C T G A C T G A C G T A A C G T G T C A G T C A C G A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAAAATAATG---
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T G T A C G T C A C T G A C T G A C G T A A C G T G T C A G T C A C G A T T C A G A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAAAATAATG
DCYAAAAATAGM-
 A C G T A C G T A C G T G T A C G T C A C T G A C T G A C G T A A C G T G T C A G T C A C G A T T C A G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAAAATAATG
--AGATAASR
 G T A C G T C A C T G A C T G A C G T A A C G T G T C A G T C A C G A T T C A G
A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAAAATAATG-
-VRAACAATGG
 G T A C G T C A C T G A C T G A C G T A A C G T G T C A G T C A C G A T T C A G A C G T
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G