Information for 4-GTCCTTACTT (Motif 18)

A C T G C A G T A T G C G A T C A G C T G C A T G C T A A T G C G C A T C A G T
Reverse Opposite:
G T C A C G T A A T C G C G A T C G T A C T G A C T A G T A C G G T C A T G A C
p-value:1e-8
log p-value:-2.067e+01
Information Content per bp:1.632
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif173.0
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets52.5 +/- 26.2bp
Average Position of motif in Background49.3 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTCCTTACTT-
-TGTTTACTTT
 A C T G C A G T A T G C G A T C A G C T G C A T G C T A A T G C G C A T C A G T A C G T
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTCCTTACTT-
-TGTTTACTTT
 A C T G C A G T A T G C G A T C A G C T G C A T G C T A A T G C G C A T C A G T A C G T
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXP2/MA0593.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTCCTTACTT
TNTGTTTACTT
 A C G T A C T G C A G T A T G C G A T C A G C T G C A T G C T A A T G C G C A T C A G T
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTCCTTACTT---
-TGTTTACTTAGG
 A C T G C A G T A T G C G A T C A G C T G C A T G C T A A T G C G C A T C A G T A C G T A C G T A C G T
A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXP3/MA0850.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTCCTTACTT
-TGTTTAC--
 A C T G C A G T A T G C G A T C A G C T G C A T G C T A A T G C G C A T C A G T
A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCCTTACTT--
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C T G C A G T A T G C G A T C A G C T G C A T G C T A A T G C G C A T C A G T A C G T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTCCTTACTT---
NNNTTTGTTTACTTTTN
 A C G T A C G T A C G T A C G T A C T G C A G T A T G C G A T C A G C T G C A T G C T A A T G C G C A T C A G T A C G T A C G T A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTCCTTACTT-
CNTGTTTACATA
 A C G T A C T G C A G T A T G C G A T C A G C T G C A T G C T A A T G C G C A T C A G T A C G T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTCCTTACTT
-TGTTTACH-
 A C T G C A G T A T G C G A T C A G C T G C A T G C T A A T G C G C A T C A G T
A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTCCTTACTT---
CTTTGTTTACTTTTN
 A C G T A C G T A C T G C A G T A T G C G A T C A G C T G C A T G C T A A T G C G C A T C A G T A C G T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G