Information for 2-ATCAATTTTG (Motif 16)

G C T A C G A T T G A C G T C A G T C A C A G T C G A T G C A T C G A T A C T G
Reverse Opposite:
T G A C G C T A C G T A G C T A G T C A C A G T C A G T A C T G G C T A C G A T
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.490
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif4.32%
Number of Background Sequences with motif418.9
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets47.4 +/- 23.1bp
Average Position of motif in Background48.3 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---ATCAATTTTG-
NNTNNCAATATTAG
 A C G T A C G T A C G T G C T A C G A T T G A C G T C A G T C A C A G T C G A T G C A T C G A T A C T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---ATCAATTTTG-
NNTNNCAATATTAG
 A C G T A C G T A C G T G C T A C G A T T G A C G T C A G T C A C A G T C G A T G C A T C G A T A C T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ATCAATTTTG
HNRAATCAAT----
 A C G T A C G T A C G T A C G T G C T A C G A T T G A C G T C A G T C A C A G T C G A T G C A T C G A T A C T G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATCAATTTTG
TAATCAATTA--
 A C G T A C G T G C T A C G A T T G A C G T C A G T C A C A G T C G A T G C A T C G A T A C T G
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATCAATTTTG
ATGAATATTC
 G C T A C G A T T G A C G T C A G T C A C A G T C G A T G C A T C G A T A C T G
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------ATCAATTTTG-
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T T G A C G T C A G T C A C A G T C G A T G C A T C G A T A C T G A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATCAATTTTG
DGATCRATAN--
 A C G T A C G T G C T A C G A T T G A C G T C A G T C A C A G T C G A T G C A T C G A T A C T G
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATCAATTTTG-
ANTATCGATTTTTN
 A C G T A C G T A C G T G C T A C G A T T G A C G T C A G T C A C A G T C G A T G C A T C G A T A C T G A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATCAATTTTG-
ATTATCGATTTTTT
 A C G T A C G T A C G T G C T A C G A T T G A C G T C A G T C A C A G T C G A T G C A T C G A T A C T G A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATCAATTTTG-----
TTCTATTTTTAGNNN
 G C T A C G A T T G A C G T C A G T C A C A G T C G A T G C A T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T