Information for 4-TKAARARAGAAGWWGA (Motif 12)

C G A T C A G T G T C A C G T A C T A G C T G A T C G A C G T A A C T G C G T A C T G A C T A G C G T A C G A T T A C G C G T A
Reverse Opposite:
G C A T A T G C G C T A G C A T A G T C G A C T G C A T G T A C C G A T A G C T G A C T G A T C A C G T C A G T G T A C G C T A
p-value:1e-10
log p-value:-2.430e+01
Information Content per bp:1.563
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif6.02%
Number of Background Sequences with motif720.8
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets51.4 +/- 21.8bp
Average Position of motif in Background51.1 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TKAARARAGAAGWWGA--
AGTAAACAAAAAAGAACANN
 A C G T A C G T C G A T C A G T G T C A C G T A C T A G C T G A T C G A C G T A A C T G C G T A C T G A C T A G C G T A C G A T T A C G C G T A A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TKAARARAGAAGWWGA
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A C G T C G A T C A G T G T C A C G T A C T A G C T G A T C G A C G T A A C T G C G T A C T G A C T A G C G T A C G A T T A C G C G T A
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TKAARARAGAAGWWGA
BAGTCATANTGAAAG---
 A C G T A C G T C G A T C A G T G T C A C G T A C T A G C T G A T C G A C G T A A C T G C G T A C T G A C T A G C G T A C G A T T A C G C G T A
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TKAARARAGAAGWWGA
WNAGTCADAVTGAAACTN-
 A C G T A C G T A C G T C G A T C A G T G T C A C G T A C T A G C T G A T C G A C G T A A C T G C G T A C T G A C T A G C G T A C G A T T A C G C G T A
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TKAARARAGAAGWWGA
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A C G T C G A T C A G T G T C A C G T A C T A G C T G A T C G A C G T A A C T G C G T A C T G A C T A G C G T A C G A T T A C G C G T A
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TKAARARAGAAGWWGA
-AGAAAGTGAAAGTGA
 C G A T C A G T G T C A C G T A C T A G C T G A T C G A C G T A A C T G C G T A C T G A C T A G C G T A C G A T T A C G C G T A
A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TKAARARAGAAGWWGA
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T C G A T C A G T G T C A C G T A C T A G C T G A T C G A C G T A A C T G C G T A C T G A C T A G C G T A C G A T T A C G C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TKAARARAGAAGWWGA
AAACATAATGAGGTTGC
 A C G T C G A T C A G T G T C A C G T A C T A G C T G A T C G A C G T A A C T G C G T A C T G A C T A G C G T A C G A T T A C G C G T A
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----TKAARARAGAAGWWGA
CAATTGCAAAAATAT-----
 A C G T A C G T A C G T A C G T C G A T C A G T G T C A C G T A C T A G C T G A T C G A C G T A A C T G C G T A C T G A C T A G C G T A C G A T T A C G C G T A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---TKAARARAGAAGWWGA
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T C G A T C A G T G T C A C G T A C T A G C T G A T C G A C G T A A C T G C G T A C T G A C T A G C G T A C G A T T A C G C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T