Information for 2-CAATCATTAACCA (Motif 3)

A G T C C G T A T C G A A C G T A G T C G T C A G A C T A C G T C T G A C T G A A G T C A G T C G T C A
Reverse Opposite:
A C G T A C T G C T A G A G C T A G C T C G T A C G T A A C G T C T A G C G T A A C G T A C G T C T A G
p-value:1e-21
log p-value:-4.879e+01
Information Content per bp:1.802
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.3 +/- 26.0bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CAATCATTAACCA
TTAATNATTAAC--
 A C G T A G T C C G T A T C G A A C G T A G T C G T C A G A C T A C G T C T G A C T G A A G T C A G T C G T C A
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CAATCATTAACCA
GTTAATNATTAAC--
 A C G T A C G T A G T C C G T A T C G A A C G T A G T C G T C A G A C T A C G T C T G A C T G A A G T C A G T C G T C A
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CAATCATTAACCA
AGTTAATGATTAACT-
 A C G T A C G T A C G T A G T C C G T A T C G A A C G T A G T C G T C A G A C T A C G T C T G A C T G A A G T C A G T C G T C A
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CAATCATTAACCA
TTAATGTTTAACC-
 A C G T A G T C C G T A T C G A A C G T A G T C G T C A G A C T A C G T C T G A C T G A A G T C A G T C G T C A
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CAATCATTAACCA
---TCATCAATCA
 A G T C C G T A T C G A A C G T A G T C G T C A G A C T A C G T C T G A C T G A A G T C A G T C G T C A
A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAATCATTAACCA
---YCATTAMC--
 A G T C C G T A T C G A A C G T A G T C G T C A G A C T A C G T C T G A C T G A A G T C A G T C G T C A
A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAATCATTAACCA
-RGCCATYAATCA
 A G T C C G T A T C G A A C G T A G T C G T C A G A C T A C G T C T G A C T G A A G T C A G T C G T C A
A C G T C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAATCATTAACCA
--GTAATTAA---
 A G T C C G T A T C G A A C G T A G T C G T C A G A C T A C G T C T G A C T G A A G T C A G T C G T C A
A C G T A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAATCATTAACCA
-AATTATT-----
 A G T C C G T A T C G A A C G T A G T C G T C A G A C T A C G T C T G A C T G A A G T C A G T C G T C A
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAATCATTAACCA-
GGAGGTCATTAATTAT
 A C G T A C G T A G T C C G T A T C G A A C G T A G T C G T C A G A C T A C G T C T G A C T G A A G T C A G T C G T C A A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T