Information for 13-AGGCCTCGCA (Motif 19)

C G T A A C T G A C T G G T A C A G T C A G C T A G T C A C T G G T A C C G T A
Reverse Opposite:
A C G T A C T G G T A C C T A G C T G A A C T G A C T G A G T C G T A C A C G T
p-value:1e-6
log p-value:-1.468e+01
Information Content per bp:1.850
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif63.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets63.9 +/- 19.4bp
Average Position of motif in Background51.7 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AGGCCTCGCA
AGGCCTNG--
 C G T A A C T G A C T G G T A C A G T C A G C T A G T C A C T G G T A C C G T A
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AGGCCTCGCA
AGGCCTAG--
 C G T A A C T G A C T G G T A C A G T C A G C T A G T C A C T G G T A C C G T A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCTCGCA---
CAGGCCNNGGCCNN
 A C G T C G T A A C T G A C T G G T A C A G T C A G C T A G T C A C T G G T A C C G T A A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGCCTCGCA--
AGGTCTCTAACC
 C G T A A C T G A C T G G T A C A G T C A G C T A G T C A C T G G T A C C G T A A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGCCTCGCA--
RGGGCACTAACY
 C G T A A C T G A C T G G T A C A G T C A G C T A G T C A C T G G T A C C G T A A C G T A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGCCTCGCA------
--GCCGCGCAGTGCGT
 C G T A A C T G A C T G G T A C A G T C A G C T A G T C A C T G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGCCTCGCA
CAAGGHCANV--
 A C G T A C G T C G T A A C T G A C T G G T A C A G T C A G C T A G T C A C T G G T A C C G T A
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGCCTCGCA--
-GTACCCGCATN
 C G T A A C T G A C T G G T A C A G T C A G C T A G T C A C T G G T A C C G T A A C G T A C G T
A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGCCTCGCA---
-GGCCCCGCCCCC
 C G T A A C T G A C T G G T A C A G T C A G C T A G T C A C T G G T A C C G T A A C G T A C G T A C G T
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGCCTCGCA-----
TCGTACCCGCATCATT
 A C G T C G T A A C T G A C T G G T A C A G T C A G C T A G T C A C T G G T A C C G T A A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T