Information for 7-ACAGTTCAGACAA (Motif 9)

C G T A A T G C C G T A A C T G A C G T A C G T T A G C C G T A C T A G C G T A A T G C C G T A G T C A
Reverse Opposite:
A C G T C G A T A T C G C G A T A G T C C G A T A C T G G T C A G T C A A G T C A C G T A T C G C G A T
p-value:1e-15
log p-value:-3.625e+01
Information Content per bp:1.792
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.3 +/- 29.0bp
Average Position of motif in Background48.5 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:ACAGTTCAGACAA
-----BCAGACWA
 C G T A A T G C C G T A A C T G A C G T A C G T T A G C C G T A C T A G C G T A A T G C C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACAGTTCAGACAA------
----CTCACACAATGGCGC
 C G T A A T G C C G T A A C T G A C G T A C G T T A G C C G T A C T A G C G T A A T G C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACAGTTCAGACAA
CAAAGGTCAG----
 A C G T C G T A A T G C C G T A A C T G A C G T A C G T T A G C C G T A C T A G C G T A A T G C C G T A G T C A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACAGTTCAGACAA----
CAAATCCAGACATCACA
 C G T A A T G C C G T A A C T G A C G T A C G T T A G C C G T A C T A G C G T A A T G C C G T A G T C A A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACAGTTCAGACAA
TRAGGTCA-----
 C G T A A T G C C G T A A C T G A C G T A C G T T A G C C G T A C T A G C G T A A T G C C G T A G T C A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ACAGTTCAGACAA
-----CCAGACAG
 C G T A A T G C C G T A A C T G A C G T A C G T T A G C C G T A C T A G C G T A A T G C C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACAGTTCAGACAA
--CGTCTAGACA-
 C G T A A T G C C G T A A C T G A C G T A C G T T A G C C G T A C T A G C G T A A T G C C G T A G T C A
A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACAGTTCAGACAA
TGGCAGTTGN-----
 A C G T A C G T C G T A A T G C C G T A A C T G A C G T A C G T T A G C C G T A C T A G C G T A A T G C C G T A G T C A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACAGTTCAGACAA--
-AAGATAAGATAACA
 C G T A A T G C C G T A A C T G A C G T A C G T T A G C C G T A C T A G C G T A A T G C C G T A G T C A A C G T A C G T
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:ACAGTTCAGACAA--
-----CCAGACRSVB
 C G T A A T G C C G T A A C T G A C G T A C G T T A G C C G T A C T A G C G T A A T G C C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C