Information for 4-CCGRAAGTAAACACAG (Motif 8)

A G T C G T A C A T C G C T A G C G T A C G T A A C T G A C G T C G T A G T C A C G T A A G T C T C G A A G T C C G T A C T A G
Reverse Opposite:
G A T C G A C T A C T G A G C T A C T G C G A T A C G T A C G T G T C A A G T C C G A T A C G T A G T C A T G C C A T G C T A G
p-value:1e-15
log p-value:-3.642e+01
Information Content per bp:1.808
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.3 +/- 18.3bp
Average Position of motif in Background11.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCGRAAGTAAACACAG
-CAAAAGTAAACAAAG
 A G T C G T A C A T C G C T A G C G T A C G T A A C T G A C G T C G T A G T C A C G T A A G T C T C G A A G T C C G T A C T A G
A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FOXP2/MA0593.1/Jaspar

Match Rank:2
Score:0.70
Offset:4
Orientation:forward strand
Alignment:CCGRAAGTAAACACAG
----AAGTAAACAAA-
 A G T C G T A C A T C G C T A G C G T A C G T A A C T G A C G T C G T A G T C A C G T A A G T C T C G A A G T C C G T A C T A G
A C G T A C G T A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CCGRAAGTAAACACAG
---AAAGTAAACA---
 A G T C G T A C A T C G C T A G C G T A C G T A A C T G A C G T C G T A G T C A C G T A A G T C T C G A A G T C C G T A C T A G
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CCGRAAGTAAACACAG
---AAAGTAAACA---
 A G T C G T A C A T C G C T A G C G T A C G T A A C T G A C G T C G T A G T C A C G T A A G T C T C G A A G T C C G T A C T A G
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCGRAAGTAAACACAG--
-AAAAAGTAAACAAAGAC
 A G T C G T A C A T C G C T A G C G T A C G T A A C T G A C G T C G T A G T C A C G T A A G T C T C G A A G T C C G T A C T A G A C G T A C G T
A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Foxk1/MA0852.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCGRAAGTAAACACAG--
-AAAATGTAAACAAACAG
 A G T C G T A C A T C G C T A G C G T A C G T A A C T G A C G T C G T A G T C A C G T A A G T C T C G A A G T C C G T A C T A G A C G T A C G T
A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCGRAAGTAAACACAG--
-AAAATGTAAACAAACAG
 A G T C G T A C A T C G C T A G C G T A C G T A A C T G A C G T C G T A G T C A C G T A A G T C T C G A A G T C C G T A C T A G A C G T A C G T
A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CCGRAAGTAAACACAG
----NDGTAAACARRN
 A G T C G T A C A T C G C T A G C G T A C G T A A C T G A C G T C G T A G T C A C G T A A G T C T C G A A G T C C G T A C T A G
A C G T A C G T A C G T A C G T G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:9
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CCGRAAGTAAACACAG
-----DGTAAACA---
 A G T C G T A C A T C G C T A G C G T A C G T A A C T G A C G T C G T A G T C A C G T A A G T C T C G A A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCGRAAGTAAACACAG--
-AAAAAGTAAACAAACAC
 A G T C G T A C A T C G C T A G C G T A C G T A A C T G A C G T C G T A G T C A C G T A A G T C T C G A A G T C C G T A C T A G A C G T A C G T
A C G T G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C