Information for 20-GCACCAGRGSGCA (Motif 21)

A T C G A G T C G T C A A T G C G T A C C G T A C T A G C T A G C T A G A T C G A C T G A T G C C T G A
Reverse Opposite:
A G C T A T C G A G T C A T G C G A T C A G T C A G T C A C G T A C T G A T C G A C G T A C T G A T G C
p-value:1e-9
log p-value:-2.247e+01
Information Content per bp:1.897
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif19.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.1 +/- 31.5bp
Average Position of motif in Background48.8 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GCACCAGRGSGCA----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A T C G A G T C G T C A A T G C G T A C C G T A C T A G C T A G C T A G A T C G A C T G A T G C C T G A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCACCAGRGSGCA------
GCCASCAGGGGGCGCYVNNG
 A C G T A T C G A G T C G T C A A T G C G T A C C G T A C T A G C T A G C T A G A T C G A C T G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GCACCAGRGSGCA---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A T C G A G T C G T C A A T G C G T A C C G T A C T A G C T A G C T A G A T C G A C T G A T G C C T G A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCACCAGRGSGCA-
TCACCTCTGGGCAG
 A T C G A G T C G T C A A T G C G T A C C G T A C T A G C T A G C T A G A T C G A C T G A T G C C T G A A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCACCAGRGSGCA
DCHCAGCAGGRGGCC
 A C G T A C G T A T C G A G T C G T C A A T G C G T A C C G T A C T A G C T A G C T A G A T C G A C T G A T G C C T G A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCACCAGRGSGCA
NNAGGGACAAGGGCNC-
 A C G T A C G T A C G T A C G T A T C G A G T C G T C A A T G C G T A C C G T A C T A G C T A G C T A G A T C G A C T G A T G C C T G A
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCACCAGRGSGCA
CACAGCGGGGGGTC
 A C G T A T C G A G T C G T C A A T G C G T A C C G T A C T A G C T A G C T A G A T C G A C T G A T G C C T G A
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCACCAGRGSGCA
NCGCAGCGGGGGGTC
 A C G T A C G T A T C G A G T C G T C A A T G C G T A C C G T A C T A G C T A G C T A G A T C G A C T G A T G C C T G A
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCACCAGRGSGCA
NCNCAGCGGGGGGTC
 A C G T A C G T A T C G A G T C G T C A A T G C G T A C C G T A C T A G C T A G C T A G A T C G A C T G A T G C C T G A
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCACCAGRGSGCA
ATGCAACAGGTGG--
 A C G T A C G T A T C G A G T C G T C A A T G C G T A C C G T A C T A G C T A G C T A G A T C G A C T G A T G C C T G A
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T