Information for 2-TGGGAATTGTAGT (Motif 2)

A G C T A T C G A C T G C T A G C T G A T C G A C G A T A G C T T C A G C A G T C T G A A C T G A G C T
Reverse Opposite:
T C G A T A G C G A C T G T C A A G T C T C G A G C T A A G C T G A C T A G T C G T A C T A G C C T G A
p-value:1e-40
log p-value:-9.308e+01
Information Content per bp:1.669
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif5.29%
Number of Background Sequences with motif147.5
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets52.4 +/- 21.5bp
Average Position of motif in Background44.6 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:TGGGAATTGTAGT
-GGGAATTGTAGT
 A G C T A T C G A C T G C T A G C T G A T C G A C G A T A G C T T C A G C A G T C T G A A C T G A G C T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.88
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAATTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G A C T G C T A G C T G A T C G A C G A T A G C T T C A G C A G T C T G A A C T G A G C T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.86
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAATTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G A C T G C T A G C T G A T C G A C G A T A G C T T C A G C A G T C T G A A C T G A G C T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAATTGTAGT
CSTGGGAAAD-----
 A C G T A C G T A G C T A T C G A C T G C T A G C T G A T C G A C G A T A G C T T C A G C A G T C T G A A C T G A G C T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------TGGGAATTGTAGT
RGSMTBCTGGGAAAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G A C T G C T A G C T G A T C G A C G A T A G C T T C A G C A G T C T G A A C T G A G C T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGGGAATTGTAGT---
----NNHTGTGGTTWN
 A G C T A T C G A C T G C T A G C T G A T C G A C G A T A G C T T C A G C A G T C T G A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGGGAATTGTAGT---
------CTGTGGTTTN
 A G C T A T C G A C T G C T A G C T G A T C G A C G A T A G C T T C A G C A G T C T G A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGGGAATTGTAGT--
-----GCTGTGGTTT
 A G C T A T C G A C T G C T A G C T G A T C G A C G A T A G C T T C A G C A G T C T G A A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGGGAATTGTAGT--
-----NNTGTGGTTT
 A G C T A T C G A C T G C T A G C T G A T C G A C G A T A G C T T C A G C A G T C T G A A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

PB0032.1_IRC900814_1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGGGAATTGTAGT----
-GNNATTTGTCGTAANN
 A G C T A T C G A C T G C T A G C T G A T C G A C G A T A G C T T C A G C A G T C T G A A C T G A G C T A C G T A C G T A C G T A C G T
A C G T T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T