p-value: | 1e-11 |
log p-value: | -2.539e+01 |
Information Content per bp: | 1.854 |
Number of Target Sequences with motif | 15.0 |
Percentage of Target Sequences with motif | 1.69% |
Number of Background Sequences with motif | 69.6 |
Percentage of Background Sequences with motif | 0.15% |
Average Position of motif in Targets | 47.8 +/- 28.2bp |
Average Position of motif in Background | 42.7 +/- 32.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.07 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0065.1_Hoxc10/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCTTTACGGC---- ANNTTTTACGACNTNN |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
Match Rank: | 2 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTTTACGGC- DGWTTTATGRCN |
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PH0047.1_Hoxa11/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCTTTACGGC---- NNGTTTTACGACTTTA |
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PH0066.1_Hoxc11/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCTTTACGGC---- NNNTTTTACGACNTTN |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
Match Rank: | 5 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTTTACGGC- TGATTTATGGCC |
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Hoxc9/MA0485.1/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCTTTACGGC- NTGATTTATGGCC |
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PH0077.1_Hoxd12/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCTTTACGGC---- NNNATTTTACGACNNTN |
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PH0067.1_Hoxc12/Jaspar
Match Rank: | 8 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCTTTACGGC---- GNNNTTTTACGACCTNA |
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HOXD12/MA0873.1/Jaspar
Match Rank: | 9 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTTTACGGC- NTTTTACGACT |
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HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer
Match Rank: | 10 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTTTACGGC- TGATTTATGGCC |
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