Information for 4-GATTGATTCAAAG (Motif 5)

A C T G C G T A A G C T C G A T A T C G G T C A A C G T A C G T A G T C G T C A C T G A C G T A C T A G
Reverse Opposite:
A G T C C G A T A G C T A C G T T A C G C G T A G T C A A C G T A T G C C G T A C T G A A C G T A G T C
p-value:1e-14
log p-value:-3.248e+01
Information Content per bp:1.801
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.0 +/- 25.2bp
Average Position of motif in Background51.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GATTGATTCAAAG
-ATTGATTYND--
 A C T G C G T A A G C T C G A T A T C G G T C A A C G T A C G T A G T C G T C A C T G A C G T A C T A G
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GATTGATTCAAAG-
NNCATTCATTCATNNN
 A C G T A C G T A C T G C G T A A G C T C G A T A T C G G T C A A C G T A C G T A G T C G T C A C T G A C G T A C T A G A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PH0014.1_Cphx/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GATTGATTCAAAG
ATGATCGAATCAAA-
 A C G T A C G T A C T G C G T A A G C T C G A T A T C G G T C A A C G T A C G T A G T C G T C A C T G A C G T A C T A G
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GATTGATTCAAAG
NNANTGATTGATNNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G C T C G A T A T C G G T C A A C G T A C G T A G T C G T C A C T G A C G T A C T A G
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GATTGATTCAAAG
NTGATTAAATTAN--
 A C G T A C G T A C T G C G T A A G C T C G A T A T C G G T C A A C G T A C G T A G T C G T C A C T G A C G T A C T A G
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GATTGATTCAAAG
TTTGATTGATGN----
 A C G T A C G T A C G T A C T G C G T A A G C T C G A T A T C G G T C A A C G T A C G T A G T C G T C A C T G A C G T A C T A G
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GATTGATTCAAAG
NNANTGATTGATNTTN--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G C T C G A T A T C G G T C A A C G T A C G T A G T C G T C A C T G A C G T A C T A G
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GATTGATTCAAAG
NWTGATTRGRTTAWN-
 A C G T A C G T A C G T A C T G C G T A A G C T C G A T A T C G G T C A A C G T A C G T A G T C G T C A C T G A C G T A C T A G
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C A C G T

DUX4/MA0468.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GATTGATTCAAAG
TGATTAAATTA---
 A C G T A C T G C G T A A G C T C G A T A T C G G T C A A C G T A C G T A G T C G T C A C T G A C G T A C T A G
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GATTGATTCAAAG
----NATTCAAAT
 A C T G C G T A A G C T C G A T A T C G G T C A A C G T A C G T A G T C G T C A C T G A C G T A C T A G
A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T