p-value: | 1e-11 |
log p-value: | -2.542e+01 |
Information Content per bp: | 1.873 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.65% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 40.6 +/- 15.0bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox17/MA0078.1/Jaspar
Match Rank: | 1 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | KGACAATARGGSW -GACAATGNN--- |
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PB0183.1_Sry_2/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----KGACAATARGGSW TCACGGAACAATAGGTG- |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----KGACAATARGGSW NNNNNGAACAATTGANN- |
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PB0132.1_Hbp1_2/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---KGACAATARGGSW- NNTNNACAATGGGANNN |
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PB0168.1_Sox14_2/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---KGACAATARGGSW CTCACACAATGGCGC- |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----KGACAATARGGSW TAGTGAACAATAGATTT |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 7 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | KGACAATARGGSW RAACAATGGN--- |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | KGACAATARGGSW GAACAATGGN--- |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 9 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -KGACAATARGGSW RNAACAATGG---- |
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SOX9/MA0077.1/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | KGACAATARGGSW GAACAATGG---- |
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