p-value: | 1e-9 |
log p-value: | -2.154e+01 |
Information Content per bp: | 1.887 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.76% |
Number of Background Sequences with motif | 5.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 81.5 +/- 12.9bp |
Average Position of motif in Background | 59.9 +/- 16.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.78 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTWYCTMTGGCAA GGTTGCCATGGCAA |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.77 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTWYCTMTGGCAA NGTTGCCATGGCAA |
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RFX5/MA0510.2/Jaspar
Match Rank: | 3 |
Score: | 0.76 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTWYCTMTGGCAA-- CGTTGCCATGGCAACG |
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RFX3/MA0798.1/Jaspar
Match Rank: | 4 |
Score: | 0.76 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTWYCTMTGGCAA-- CGTTGCCATGGCAACN |
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RFX4/MA0799.1/Jaspar
Match Rank: | 5 |
Score: | 0.75 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTWYCTMTGGCAA-- CGTTGCCATGGCAACG |
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RFX2/MA0600.2/Jaspar
Match Rank: | 6 |
Score: | 0.75 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTWYCTMTGGCAA-- CGTTGCCATGGCAACG |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 7 |
Score: | 0.75 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTWYCTMTGGCAA- KGTTGCCATGGCAAC |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 8 |
Score: | 0.74 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTWYCTMTGGCAA- CGGTTGCCATGGCAAC |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 9 |
Score: | 0.73 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTWYCTMTGGCAA- GTTGCCATGGCAAC |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 10 |
Score: | 0.63 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GTWYCTMTGGCAA -----CTTGGCAA |
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