Information for 1-BTGGACTTTGVHCYYT (Motif 1)

A G C T C G A T C T A G T C A G G T C A G T A C A G C T A G C T A G C T T C A G T C G A G T C A G T A C G A C T A G T C G C A T
Reverse Opposite:
C G T A T C A G C T G A C A T G C A G T A G C T A G T C T C G A T C G A T C G A C A T G C A G T A G T C G A T C G C T A T C G A
p-value:1e-425
log p-value:-9.798e+02
Information Content per bp:1.574
Number of Target Sequences with motif451.0
Percentage of Target Sequences with motif57.16%
Number of Background Sequences with motif1679.3
Percentage of Background Sequences with motif3.57%
Average Position of motif in Targets52.3 +/- 20.9bp
Average Position of motif in Background49.0 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.99
Offset:1
Orientation:reverse strand
Alignment:BTGGACTTTGVHCYYT
-TGGACTTTGNNCTCN
 A G C T C G A T C T A G T C A G G T C A G T A C A G C T A G C T A G C T T C A G T C G A G T C A G T A C G A C T A G T C G C A T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.99
Offset:1
Orientation:reverse strand
Alignment:BTGGACTTTGVHCYYT-
-TGGACTTTGNNCTNTG
 A G C T C G A T C T A G T C A G G T C A G T A C A G C T A G C T A G C T T C A G T C G A G T C A G T A C G A C T A G T C G C A T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-BTGGACTTTGVHCYYT
ATTGGACTTTGACCCC-
 A C G T A G C T C G A T C T A G T C A G G T C A G T A C A G C T A G C T A G C T T C A G T C G A G T C A G T A C G A C T A G T C G C A T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:BTGGACTTTGVHCYYT
-TGACCTTTGACCCC-
 A G C T C G A T C T A G T C A G G T C A G T A C A G C T A G C T A G C T T C A G T C G A G T C A G T A C G A C T A G T C G C A T
A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:BTGGACTTTGVHCYYT
-TGACCTTTGACCTC-
 A G C T C G A T C T A G T C A G G T C A G T A C A G C T A G C T A G C T T C A G T C G A G T C A G T A C G A C T A G T C G C A T
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:BTGGACTTTGVHCYYT
-TGACCTTTGACCCC-
 A G C T C G A T C T A G T C A G G T C A G T A C A G C T A G C T A G C T T C A G T C G A G T C A G T A C G A C T A G T C G C A T
A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:BTGGACTTTGVHCYYT
-TGACCTTTGACCCC-
 A G C T C G A T C T A G T C A G G T C A G T A C A G C T A G C T A G C T T C A G T C G A G T C A G T A C G A C T A G T C G C A T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:8
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:BTGGACTTTGVHCYYT
-TGACCTTTGACCTN-
 A G C T C G A T C T A G T C A G G T C A G T A C A G C T A G C T A G C T T C A G T C G A G T C A G T A C G A C T A G T C G C A T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---BTGGACTTTGVHCYYT
NNATTGGACTTTNGNN---
 A C G T A C G T A C G T A G C T C G A T C T A G T C A G G T C A G T A C A G C T A G C T A G C T T C A G T C G A G T C A G T A C G A C T A G T C G C A T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:BTGGACTTTGVHCYYT
-TGACCTTTGCCCTA-
 A G C T C G A T C T A G T C A G G T C A G T A C A G C T A G C T A G C T T C A G T C G A G T C A G T A C G A C T A G T C G C A T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T