Information for 6-TTTAACCAGG (Motif 9)

A C G T A G C T G A C T G T C A G T C A A G T C G T A C C G T A C T A G A C T G
Reverse Opposite:
T A G C A G T C A C G T A C T G A C T G C A G T A C G T C T G A C T G A C G T A
p-value:1e-13
log p-value:-3.071e+01
Information Content per bp:1.847
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.0 +/- 29.4bp
Average Position of motif in Background50.3 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTAACCAGG
GTTAACTAGN
 A C G T A G C T G A C T G T C A G T C A A G T C G T A C C G T A C T A G A C T G
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTTAACCAGG----
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A G C T G A C T G T C A G T C A A G T C G T A C C G T A C T A G A C T G A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTAACCAGG
NTTTTACGAGN
 A C G T A C G T A G C T G A C T G T C A G T C A A G T C G T A C C G T A C T A G A C T G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TTTAACCAGG---
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T C A G T C A A G T C G T A C C G T A C T A G A C T G A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTAACCAGG---
NNNGTAACTANGNNA
 A C G T A C G T A C G T A G C T G A C T G T C A G T C A A G T C G T A C C G T A C T A G A C T G A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PB0081.1_Tcf1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTTAACCAGG--
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T C A G T C A A G T C G T A C C G T A C T A G A C T G A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTAACCAGG---
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A C G T A G C T G A C T G T C A G T C A A G T C G T A C C G T A C T A G A C T G A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTAACCAGG---
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T A G C T G A C T G T C A G T C A A G T C G T A C C G T A C T A G A C T G A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TTTAACCAGG-------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T C A G T C A A G T C G T A C C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

LBX1/MA0618.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTTAACCAGG
-TTAATTAG-
 A C G T A G C T G A C T G T C A G T C A A G T C G T A C C G T A C T A G A C T G
A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T