Information for 13-ACRTRAAGAG (Motif 27)

G T C A A G T C C T G A A C G T C T A G G T C A C G T A C T A G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A C G T A G T C C G T A A G C T A C T G A C G T
p-value:1e-6
log p-value:-1.473e+01
Information Content per bp:1.861
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif24.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets50.6 +/- 30.0bp
Average Position of motif in Background49.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ACRTRAAGAG--
--BTBRAGTGSN
 G T C A A G T C C T G A A C G T C T A G G T C A C G T A C T A G C G T A A C T G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACRTRAAGAG-----
AAACATAATGAGGTTGC
 A C G T A C G T G T C A A G T C C T G A A C G T C T A G G T C A C G T A C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ACRTRAAGAG---
---TTGAGTGSTT
 G T C A A G T C C T G A A C G T C T A G G T C A C G T A C T A G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

FOXL1/MA0033.2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACRTRAAGAG
--GTAAACA-
 G T C A A G T C C T G A A C G T C T A G G T C A C G T A C T A G C G T A A C T G
A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACRTRAAGAG
AAATAAACA-
 G T C A A G T C C T G A A C G T C T A G G T C A C G T A C T A G C G T A A C T G
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACRTRAAGAG--
--CTYRAGTGSY
 G T C A A G T C C T G A A C G T C T A G G T C A C G T A C T A G C G T A A C T G A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACRTRAAGAG-----
GACGATAATGAGCTTGC
 A C G T A C G T G T C A A G T C C T G A A C G T C T A G G T C A C G T A C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

FOXO4/MA0848.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACRTRAAGAG
--GTAAACA-
 G T C A A G T C C T G A A C G T C T A G G T C A C G T A C T A G C G T A A C T G
A C G T A C G T T C A G C G A T T G C A G T C A C T G A G A T C C G T A A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACRTRAAGAG
--GTAAACAG
 G T C A A G T C C T G A A C G T C T A G G T C A C G T A C T A G C G T A A C T G
A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACRTRAAGAG-
KCCAAAAATAGC
 A C G T G T C A A G T C C T G A A C G T C T A G G T C A C G T A C T A G C G T A A C T G A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C