Information for 12-GTGGCCAACA (Motif 26)

A C T G A C G T A C T G A C T G A G T C A G T C C T G A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G C T A C T G A C T G A G T C A G T C C G T A A G T C
p-value:1e-6
log p-value:-1.502e+01
Information Content per bp:1.964
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets71.2 +/- 26.8bp
Average Position of motif in Background39.3 +/- 42.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTGGCCAACA--
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C T G A C G T A A G T C C G T A A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCCAACA
TGGGGCCCAC-
 A C G T A C T G A C G T A C T G A C T G A G T C A G T C C T G A C G T A A G T C C G T A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTGGCCAACA
--TGCCAA--
 A C T G A C G T A C T G A C T G A G T C A G T C C T G A C G T A A G T C C G T A
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTGGCCAACA
CGTGCCAAG-
 A C T G A C G T A C T G A C T G A G T C A G T C C T G A C G T A A G T C C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGGCCAACA
AGGTGHCAGACA
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C T G A C G T A A G T C C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGGCCAACA
GGTGCCAAGT
 A C T G A C G T A C T G A C T G A G T C A G T C C T G A C G T A A G T C C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCCAACA-
AGGTGNCAGACAG
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C T G A C G T A A G T C C G T A A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGGCCAACA---
ARGAGGMCAAAATGW
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C T G A C G T A A G T C C G T A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GTGGCCAACA--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C T G A C G T A A G T C C G T A A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTGGCCAACA
GTGGAT----
 A C T G A C G T A C T G A C T G A G T C A G T C C T G A C G T A A G T C C G T A
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T