Information for 10-ACGTGACGTC (Motif 24)

C T G A T A G C A T C G A C G T A T C G T G C A A G T C A T C G G C A T A G T C
Reverse Opposite:
T C A G C G T A T A G C T C A G A C G T A T G C T G C A A T G C A T C G A G C T
p-value:1e-8
log p-value:-2.048e+01
Information Content per bp:1.666
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif175.0
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets43.7 +/- 24.4bp
Average Position of motif in Background53.6 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--ACGTGACGTC
NCACGTGACN--
 A C G T A C G T C T G A T A G C A T C G A C G T A T C G T G C A A G T C A T C G G C A T A G T C
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ACGTGACGTC
TCACGTGACCGG
 A C G T A C G T C T G A T A G C A T C G A C G T A T C G T G C A A G T C A T C G G C A T A G T C
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

BHLHE41/MA0636.1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---ACGTGACGTC
GTCACGTGAC---
 A C G T A C G T A C G T C T G A T A G C A T C G A C G T A T C G T G C A A G T C A T C G G C A T A G T C
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--ACGTGACGTC
TCACGTGACC--
 A C G T A C G T C T G A T A G C A T C G A C G T A T C G T G C A A G T C A T C G G C A T A G T C
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---ACGTGACGTC
GCCACGTGACC--
 A C G T A C G T A C G T C T G A T A G C A T C G A C G T A T C G T G C A A G T C A T C G G C A T A G T C
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:6
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:ACGTGACGTC----
--GTGACGTCACCG
 C T G A T A G C A T C G A C G T A T C G T G C A A G T C A T C G G C A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ACGTGACGTC
NCGTGACN--
 C T G A T A G C A T C G A C G T A T C G T G C A A G T C A T C G G C A T A G T C
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---ACGTGACGTC
ATCACGTGAC---
 A C G T A C G T A C G T C T G A T A G C A T C G A C G T A T C G T G C A A G T C A T C G G C A T A G T C
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:9
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---ACGTGACGTC
ATCACGTGAC---
 A C G T A C G T A C G T C T G A T A G C A T C G A C G T A T C G T G C A A G T C A T C G G C A T A G T C
T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACGTGACGTC
TACGTGCV---
 A C G T C T G A T A G C A T C G A C G T A T C G T G C A A G T C A T C G G C A T A G T C
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T