Information for 11-GCCCTCTGSTGGC (Motif 8)

A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C T G A T G C A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C T C G A A T C G A G T C C G T A A C T G C T G A A C T G A C T G A C T G G T A C
p-value:1e-13
log p-value:-3.129e+01
Information Content per bp:1.893
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif15.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.6 +/- 23.9bp
Average Position of motif in Background45.5 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.86
Offset:-7
Orientation:forward strand
Alignment:-------GCCCTCTGSTGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C T G A T G C A C G T A C T G A C T G A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTCTGSTGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C T G A T G C A C G T A C T G A C T G A G T C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.85
Offset:-5
Orientation:forward strand
Alignment:-----GCCCTCTGSTGGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C T G A T G C A C G T A C T G A C T G A G T C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCCCTCTGSTGGC
GCCATCTGTT---
 A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C T G A T G C A C G T A C T G A C T G A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCCTCTGSTGGC
ACCATCTGTT---
 A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C T G A T G C A C G T A C T G A C T G A G T C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCCTCTGSTGGC
RCCATMTGTT---
 A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C T G A T G C A C G T A C T G A C T G A G T C
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCTGSTGGC-
GGCCYCCTGCTGDGH
 A C G T A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C T G A T G C A C G T A C T G A C T G A G T C A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCCCTCTGSTGGC
-CCCCCTGCTGTG
 A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C T G A T G C A C G T A C T G A C T G A G T C
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCCTCTGSTGGC
GCCAGCTGBTNB-
 A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C T G A T G C A C G T A C T G A C T G A G T C
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCCTCTGSTGGC
CGACCATCTGTT---
 A C G T A C G T A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C T G A T G C A C G T A C T G A C T G A G T C
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T A C G T A C G T A C G T