Information for 14-TAATGGCAAG (Motif 16)

A G C T C G T A C G T A C G A T A T C G A C T G A G T C T C G A C G T A C T A G
Reverse Opposite:
A G T C A C G T A G C T A C T G A G T C A T G C G C T A A C G T G A C T C T G A
p-value:1e-9
log p-value:-2.076e+01
Information Content per bp:1.852
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif52.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets43.7 +/- 16.5bp
Average Position of motif in Background46.0 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TAATGGCAAG---
--AAGGCAAGTGT
 A G C T C G T A C G T A C G A T A T C G A C T G A G T C T C G A C G T A C T A G A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TAATGGCAAG
GTTAATGGCC--
 A C G T A C G T A G C T C G T A C G T A C G A T A T C G A C T G A G T C T C G A C G T A C T A G
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TAATGGCAAG
CTAATKGV---
 A C G T A G C T C G T A C G T A C G A T A T C G A C T G A G T C T C G A C G T A C T A G
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGCAAG
NTAATTGN---
 A C G T A G C T C G T A C G T A C G A T A T C G A C T G A G T C T C G A C G T A C T A G
A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TAATGGCAAG-
TAATGGCGGNC
 A G C T C G T A C G T A C G A T A T C G A C T G A G T C T C G A C G T A C T A G A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TAATGGCAAG
GKTAATGR----
 A C G T A C G T A G C T C G T A C G T A C G A T A T C G A C T G A G T C T C G A C G T A C T A G
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGCAAG
NTAATTGG---
 A C G T A G C T C G T A C G T A C G A T A T C G A C T G A G T C T C G A C G T A C T A G
A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TAATGGCAAG
TNNGGGCAG-
 A G C T C G T A C G T A C G A T A T C G A C T G A G T C T C G A C G T A C T A G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TAATGGCAAG-
TTTATTAATTGCNNGN
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A C G A T A T C G A C T G A G T C T C G A C G T A C T A G A C G T
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TAATGGCAAG-
-AATGGAAAAT
 A G C T C G T A C G T A C G A T A T C G A C T G A G T C T C G A C G T A C T A G A C G T
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T