Information for 15-GCAGCCATCTTAC (Motif 13)

A C T G A G T C G T C A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C T G A A T G C
Reverse Opposite:
A T C G A G C T C G T A C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.103e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.8 +/- 25.4bp
Average Position of motif in Background51.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GCAGCCATCTTAC
GCCGCCATCTTG-
 A C T G A G T C G T C A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C T G A A T G C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GCAGCCATCTTAC
GCNGCCATCTTG-
 A C T G A G T C G T C A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C T G A A T G C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCAGCCATCTTAC
GTCCGCCATTA---
 A C G T A C T G A G T C G T C A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C T G A A T G C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCCATCTTAC---
CCNNACCATCTGGCCTN
 A C G T A C T G A G T C G T C A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C T G A A T G C A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCAGCCATCTTAC
---GCCATCTGTT
 A C T G A G T C G T C A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C T G A A T G C
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCAGCCATCTTAC
---ACCATCTGTT
 A C T G A G T C G T C A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C T G A A T G C
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCAGCCATCTTAC
GYCATCMATCAT--
 A C G T A C T G A G T C G T C A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C T G A A T G C
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCAGCCATCTTAC
TAAGGCGTCTTG-
 A C T G A G T C G T C A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C T G A A T G C
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCCATCTTAC--
NNNCTGATATCTCNNNN
 A C G T A C G T A C T G A G T C G T C A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C T G A A T G C A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCAGCCATCTTAC
BCAGACWA-----
 A C T G A G T C G T C A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C T G A A T G C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T