Information for 4-CTCAGAAAGTCAATAT (Motif 7)

G A T C G A C T T G A C C T G A C A T G C G T A T G C A T C G A C T A G A C G T T A G C C G T A C T G A G A C T T G C A G C A T
Reverse Opposite:
C G T A A C G T C T G A G A C T A C G T A T C G T G C A G A T C A G C T A C G T G C A T G A T C G A C T A C T G C T G A C T A G
p-value:1e-13
log p-value:-3.213e+01
Information Content per bp:1.723
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.7 +/- 21.4bp
Average Position of motif in Background75.3 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:CTCAGAAAGTCAATAT
----AAAAGTCAA---
 G A T C G A C T T G A C C T G A C A T G C G T A T G C A T C G A C T A G A C G T T A G C C G T A C T G A G A C T T G C A G C A T
A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CTCAGAAAGTCAATAT
-----TATGTAAATAT
 G A T C G A C T T G A C C T G A C A T G C G T A T G C A T C G A C T A G A C G T T A G C C G T A C T G A G A C T T G C A G C A T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CTCAGAAAGTCAATAT
-----TATGTAAATAT
 G A T C G A C T T G A C C T G A C A T G C G T A T G C A T C G A C T A G A C G T T A G C C G T A C T G A G A C T T G C A G C A T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTCAGAAAGTCAATAT
-----WAAGTAAAYA-
 G A T C G A C T T G A C C T G A C A T G C G T A T G C A T C G A C T A G A C G T T A G C C G T A C T G A G A C T T G C A G C A T
A C G T A C G T A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CTCAGAAAGTCAATAT-
-----TAAGTAAACAAA
 G A T C G A C T T G A C C T G A C A T G C G T A T G C A T C G A C T A G A C G T T A G C C G T A C T G A G A C T T G C A G C A T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CTCAGAAAGTCAATAT
-----AAAGTAAACA-
 G A T C G A C T T G A C C T G A C A T G C G T A T G C A T C G A C T A G A C G T T A G C C G T A C T G A G A C T T G C A G C A T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CTCAGAAAGTCAATAT
-----AAAGTAAACA-
 G A T C G A C T T G A C C T G A C A T G C G T A T G C A T C G A C T A G A C G T T A G C C G T A C T G A G A C T T G C A G C A T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTCAGAAAGTCAATAT--
---NCWRWGTAAACANSV
 G A T C G A C T T G A C C T G A C A T G C G T A T G C A T C G A C T A G A C G T T A G C C G T A C T G A G A C T T G C A G C A T A C G T A C G T
A C G T A C G T A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTCAGAAAGTCAATAT-
-----TATGTAAACANG
 G A T C G A C T T G A C C T G A C A T G C G T A T G C A T C G A C T A G A C G T T A G C C G T A C T G A G A C T T G C A G C A T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXA1/MA0148.3/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTCAGAAAGTCAATAT---
----CAAAGTAAACANNNN
 G A T C G A C T T G A C C T G A C A T G C G T A T G C A T C G A C T A G A C G T T A G C C G T A C T G A G A C T T G C A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A