Information for 3-AACAAATATTGSTTCA (Motif 6)

G T C A C T G A A G T C C G T A C G T A C G T A A G C T C G T A A C G T A C G T A C T G T A C G G A C T A G C T A T G C C G T A
Reverse Opposite:
C G A T T A C G T C G A C G T A A T G C T G A C C G T A C G T A A C G T C T G A A C G T C G A T A C G T C T A G A G C T A C G T
p-value:1e-13
log p-value:-3.213e+01
Information Content per bp:1.765
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.3 +/- 17.5bp
Average Position of motif in Background73.7 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AACAAATATTGSTTCA
AAACAAACATTC-----
 A C G T G T C A C T G A A G T C C G T A C G T A C G T A A G C T C G T A A C G T A C G T A C T G T A C G G A C T A G C T A T G C C G T A
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AACAAATATTGSTTCA
--CTAATATTGCTAAA
 G T C A C T G A A G T C C G T A C G T A C G T A A G C T C G T A A C G T A C G T A C T G T A C G G A C T A G C T A T G C C G T A
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AACAAATATTGSTTCA
--CTAATATTGCTAAA
 G T C A C T G A A G T C C G T A C G T A C G T A A G C T C G T A A C G T A C G T A C T G T A C G G A C T A G C T A T G C C G T A
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0172.1_Sox1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AACAAATATTGSTTCA
NNNTAACAATTATAN-----
 A C G T A C G T A C G T A C G T G T C A C T G A A G T C C G T A C G T A C G T A A G C T C G T A A C G T A C G T A C T G T A C G G A C T A G C T A T G C C G T A
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AACAAATATTGSTTCA
AAATAAACA--------
 A C G T G T C A C T G A A G T C C G T A C G T A C G T A A G C T C G T A A C G T A C G T A C T G T A C G G A C T A G C T A T G C C G T A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AACAAATATTGSTTCA
---AATTATT------
 G T C A C T G A A G T C C G T A C G T A C G T A A G C T C G T A A C G T A C G T A C T G T A C G G A C T A G C T A T G C C G T A
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AACAAATATTGSTTCA
WAAGTAAAYA--------
 A C G T A C G T G T C A C T G A A G T C C G T A C G T A C G T A A G C T C G T A A C G T A C G T A C T G T A C G G A C T A G C T A T G C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AACAAATATTGSTTCA
AATAAACAATN-----
 G T C A C T G A A G T C C G T A C G T A C G T A A G C T C G T A A C G T A C G T A C T G T A C G G A C T A G C T A T G C C G T A
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AACAAATATTGSTTCA
AACAAT----------
 G T C A C T G A A G T C C G T A C G T A C G T A A G C T C G T A A C G T A C G T A C T G T A C G G A C T A G C T A T G C C G T A
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AACAAATATTGSTTCA
TNCNNAACAATTTTTNC----
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A A G T C C G T A C G T A C G T A A G C T C G T A A C G T A C G T A C T G T A C G G A C T A G C T A T G C C G T A
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T A C G T A C G T A C G T