Information for 14-AGGGTCAATS (Motif 19)

C G T A A C T G C T A G A C T G A C G T A G T C C G T A C G T A A C G T A T G C
Reverse Opposite:
A T C G C G T A C G A T A C G T A C T G C G T A A G T C A G T C A G T C A C G T
p-value:1e-7
log p-value:-1.749e+01
Information Content per bp:1.906
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif26.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets29.0 +/- 29.0bp
Average Position of motif in Background42.1 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGGGTCAATS
-AGGTCA---
 C G T A A C T G C T A G A C T G A C G T A G T C C G T A C G T A A C G T A T G C
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----AGGGTCAATS--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C T G A C G T A G T C C G T A C G T A A C G T A T G C A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGGGTCAATS
AGRGGTCA---
 A C G T C G T A A C T G C T A G A C T G A C G T A G T C C G T A C G T A A C G T A T G C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AGGGTCAATS-
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C T G A C G T A G T C C G T A C G T A A C G T A T G C A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AGGGTCAATS-
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C T G A C G T A G T C C G T A C G T A A C G T A T G C A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AGGGTCAATS-
CAAAGGTCAAGGG
 A C G T A C G T C G T A A C T G C T A G A C T G A C G T A G T C C G T A C G T A A C G T A T G C A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AGGGTCAATS-
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C T G A C G T A G T C C G T A C G T A A C G T A T G C A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGGGTCAATS
TCAAGGTCAT--
 A C G T A C G T C G T A A C T G C T A G A C T G A C G T A G T C C G T A C G T A A C G T A T G C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGTCAATS--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G A C T G A C G T A G T C C G T A C G T A A C G T A T G C A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGGGTCAATS
TCAAGGTCATA-
 A C G T A C G T C G T A A C T G C T A G A C T G A C G T A G T C C G T A C G T A A C G T A T G C
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T