Information for 16-AAGGGCATGTTGC (Motif 17)

C G T A C G T A C T A G C T A G A C T G A G T C C G T A G A C T A C T G A C G T A C G T A T C G G T A C
Reverse Opposite:
A C T G A T G C C G T A C G T A A G T C C T G A A C G T A C T G T A G C A G T C A G T C A C G T A C G T
p-value:1e-8
log p-value:-2.039e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets28.9 +/- 12.6bp
Average Position of motif in Background50.1 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGGGCATGTTGC
-AAGGCAAGTGT-
 C G T A C G T A C T A G C T A G A C T G A G T C C G T A G A C T A C T G A C G T A C G T A T C G G T A C
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGGGCATGTTGC
CAAGGHCANV----
 A C G T C G T A C G T A C T A G C T A G A C T G A G T C C G T A G A C T A C T G A C G T A C G T A T C G G T A C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAGGGCATGTTGC-
----GCACGTACCC
 C G T A C G T A C T A G C T A G A C T G A G T C C G T A G A C T A C T G A C G T A C G T A T C G G T A C A C G T
A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AAGGGCATGTTGC
----GCACGTAY-
 C G T A C G T A C T A G C T A G A C T G A G T C C G T A G A C T A C T G A C G T A C G T A T C G G T A C
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAGGGCATGTTGC
TCAAGGTCAT-----
 A C G T A C G T C G T A C G T A C T A G C T A G A C T G A G T C C G T A G A C T A C T G A C G T A C G T A T C G G T A C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AAGGGCATGTTGC
----GCACGTNC-
 C G T A C G T A C T A G C T A G A C T G A G T C C G T A G A C T A C T G A C G T A C G T A T C G G T A C
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAGGGCATGTTGC
TATTCAAGGTCATGCGA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G C T A G A C T G A G T C C G T A G A C T A C T G A C G T A C G T A T C G G T A C
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGGGCATGTTGC--
NAGGTCACNNTGACC
 C G T A C G T A C T A G C T A G A C T G A G T C C G T A G A C T A C T G A C G T A C G T A T C G G T A C A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGCATGTTGC
TCAAGGTCAN-----
 A C G T A C G T C G T A C G T A C T A G C T A G A C T G A G T C C G T A G A C T A C T G A C G T A C G T A T C G G T A C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AAGGGCATGTTGC
---GGCACGTGNC
 C G T A C G T A C T A G C T A G A C T G A G T C C G T A G A C T A C T G A C G T A C G T A T C G G T A C
A C G T A C G T A C G T A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C