Information for 10-WCATWATATTTGC (Motif 11)

C G A T A T G C C G T A A G C T G C T A C T G A A C G T C G T A A C G T A C G T A C G T C T A G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A C G T A C G A T C G T A A G C T C G A T C T G A A C G T A T C G C G T A
p-value:1e-11
log p-value:-2.582e+01
Information Content per bp:1.906
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.3 +/- 19.0bp
Average Position of motif in Background18.8 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--WCATWATATTTGC
NNTNNCAATATTAG-
 A C G T A C G T C G A T A T G C C G T A A G C T G C T A C T G A A C G T C G T A A C G T A C G T A C G T C T A G A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--WCATWATATTTGC
NNTNNCAATATTAG-
 A C G T A C G T C G A T A T G C C G T A A G C T G C T A C T G A A C G T C G T A A C G T A C G T A C G T C T A G A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--WCATWATATTTGC-
NANTATTATAATTNNN
 A C G T A C G T C G A T A T G C C G T A A G C T G C T A C T G A A C G T C G T A A C G T A C G T A C G T C T A G A G T C A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--WCATWATATTTGC-
NNTAATTATAATTNNN
 A C G T A C G T C G A T A T G C C G T A A G C T G C T A C T G A A C G T C G T A A C G T A C G T A C G T C T A G A G T C A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.62
Offset:6
Orientation:forward strand
Alignment:WCATWATATTTGC---
------TRTTTACTTW
 C G A T A T G C C G T A A G C T G C T A C T G A A C G T C G T A A C G T A C G T A C G T C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

PB0069.1_Sox21_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--WCATWATATTTGC-
TTTAATTATAATTAAG
 A C G T A C G T C G A T A T G C C G T A A G C T G C T A C T G A A C G T C G T A A C G T A C G T A C G T C T A G A G T C A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

FOXB1/MA0845.1/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:WCATWATATTTGC---
-----ATATTTACATA
 C G A T A T G C C G T A A G C T G C T A C T G A A C G T C G T A A C G T A C G T A C G T C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:WCATWATATTTGC----
-------ATTTGCATAT
 C G A T A T G C C G T A A G C T G C T A C T G A A C G T C G T A A C G T A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:WCATWATATTTGC---
-----ATATTTACATA
 C G A T A T G C C G T A A G C T G C T A C T G A A C G T C G T A A C G T A C G T A C G T C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.59
Offset:7
Orientation:forward strand
Alignment:WCATWATATTTGC----
-------ATTTGCATAA
 C G A T A T G C C G T A A G C T G C T A C T G A A C G T C G T A A C G T A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A