Information for 6-ACAGAGGACAGAGGTC (Motif 10)

T G C A T A G C G C T A C T A G C G T A A C T G A C T G G C T A G A T C G T C A T C A G C T G A C A T G C T A G A G C T G A T C
Reverse Opposite:
C T A G C T G A A G T C G A T C A G C T A G T C A C G T C T A G C G A T G T A C G T A C G A C T A G T C C G A T A C T G A C G T
p-value:1e-11
log p-value:-2.659e+01
Information Content per bp:1.648
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif69.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets58.2 +/- 19.7bp
Average Position of motif in Background51.9 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ACAGAGGACAGAGGTC-
--AGGGGTCAGAGGTCA
 T G C A T A G C G C T A C T A G C G T A A C T G A C T G G C T A G A T C G T C A T C A G C T G A C A T G C T A G A G C T G A T C A C G T
A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:ACAGAGGACAGAGGTC-
---GAGGTCAAAGGTCA
 T G C A T A G C G C T A C T A G C G T A A C T G A C T G G C T A G A T C G T C A T C A G C T G A C A T G C T A G A G C T G A T C A C G T
A C G T A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Nr2f6/MA0677.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ACAGAGGACAGAGGTC-
---GAGGTCAAAGGTCA
 T G C A T A G C G C T A C T A G C G T A A C T G A C T G G C T A G A T C G T C A T C A G C T G A C A T G C T A G A G C T G A T C A C G T
A C G T A C G T A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ACAGAGGACAGAGGTC-
---TAGGGCAAAGGTCA
 T G C A T A G C G C T A C T A G C G T A A C T G A C T G G C T A G A T C G T C A T C A G C T G A C A T G C T A G A G C T G A T C A C G T
A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ACAGAGGACAGAGGTC-
---GGGGTCAAAGGTCA
 T G C A T A G C G C T A C T A G C G T A A C T G A C T G G C T A G A T C G T C A T C A G C T G A C A T G C T A G A G C T G A T C A C G T
A C G T A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ACAGAGGACAGAGGTC-
---GGGGTCAAAGGTCA
 T G C A T A G C G C T A C T A G C G T A A C T G A C T G G C T A G A T C G T C A T C A G C T G A C A T G C T A G A G C T G A T C A C G T
A C G T A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACAGAGGACAGAGGTC---
--AAAGGTCAAAGGTCAAC
 T G C A T A G C G C T A C T A G C G T A A C T G A C T G G C T A G A T C G T C A T C A G C T G A C A T G C T A G A G C T G A T C A C G T A C G T A C G T
A C G T A C G T G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACAGAGGACAGAGGTC-
-CANAGNNCAAAGTCCA
 T G C A T A G C G C T A C T A G C G T A A C T G A C T G G C T A G A T C G T C A T C A G C T G A C A T G C T A G A G C T G A T C A C G T
A C G T G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACAGAGGACAGAGGTC
-CAAAGGTCAG-----
 T G C A T A G C G C T A C T A G C G T A A C T G A C T G G C T A G A T C G T C A T C A G C T G A C A T G C T A G A G C T G A T C
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ACAGAGGACAGAGGTC-
---GGGGTCAAAGGTCA
 T G C A T A G C G C T A C T A G C G T A A C T G A C T G G C T A G A T C G T C A T C A G C T G A C A T G C T A G A G C T G A T C A C G T
A C G T A C G T A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A