Information for 1-BHTGTTTACWTAG (Motif 1)

A G T C G A C T A C G T T C A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C T A G
Reverse Opposite:
G A T C G C A T T C G A C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A C T G A T C A G
p-value:1e-466
log p-value:-1.075e+03
Information Content per bp:1.632
Number of Target Sequences with motif490.0
Percentage of Target Sequences with motif62.50%
Number of Background Sequences with motif1825.3
Percentage of Background Sequences with motif4.00%
Average Position of motif in Targets51.7 +/- 22.1bp
Average Position of motif in Background48.7 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1/MA0148.3/Jaspar

Match Rank:1
Score:0.98
Offset:-2
Orientation:forward strand
Alignment:--BHTGTTTACWTAG
TCCATGTTTACTTTG
 A C G T A C G T A G T C G A C T A C G T T C A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C T A G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxa2/MA0047.2/Jaspar

Match Rank:2
Score:0.97
Offset:2
Orientation:forward strand
Alignment:BHTGTTTACWTAG-
--TGTTTACTTAGG
 A G T C G A C T A C G T T C A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C T A G A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-BHTGTTTACWTAG-
BSNTGTTTACWYWGN
 A C G T A G T C G A C T A C G T T C A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C T A G A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.97
Offset:2
Orientation:reverse strand
Alignment:BHTGTTTACWTAG
--TGTTTACTTT-
 A G T C G A C T A C G T T C A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C T A G
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.97
Offset:2
Orientation:reverse strand
Alignment:BHTGTTTACWTAG
--TGTTTACTTT-
 A G T C G A C T A C G T T C A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C T A G
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.97
Offset:0
Orientation:forward strand
Alignment:BHTGTTTACWTAG
CNTGTTTACATA-
 A G T C G A C T A C G T T C A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C T A G
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.96
Offset:2
Orientation:forward strand
Alignment:BHTGTTTACWTAG
--TRTTTACTTW-
 A G T C G A C T A C G T T C A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C T A G
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:BHTGTTTACWTAG----
NSTGTTTRCWCAGBNNN
 A G T C G A C T A C G T T C A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C T A G A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:BHTGTTTACWTAG
TTTGTTTACTTA-
 A G T C G A C T A C G T T C A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C T A G
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:BHTGTTTACWTAG
-ATATTTACATA-
 A G T C G A C T A C G T T C A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C T A G
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T