Information for 7-GCCAAGTACTTAGCAA (Motif 8)

C T A G A T G C G A T C C G T A G C T A A T C G A C G T G C T A A G T C C A G T C G A T T G C A C T A G G T A C G C T A C G T A
Reverse Opposite:
C G A T C G A T A C T G A G T C A C G T C G T A G T C A C T A G C A G T G T C A A T G C C A G T C G A T C A T G T A C G A G T C
p-value:1e-11
log p-value:-2.734e+01
Information Content per bp:1.696
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets57.0 +/- 15.2bp
Average Position of motif in Background49.9 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGTACTTAGCAA
ACTCCAAGTACTTGGAA-
 A C G T A C G T C T A G A T G C G A T C C G T A G C T A A T C G A C G T G C T A A G T C C A G T C G A T T G C A C T A G G T A C G C T A C G T A
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCAAGTACTTAGCAA
TACTAAGTACTTAAATG
 A C G T C T A G A T G C G A T C C G T A G C T A A T C G A C G T G C T A A G T C C A G T C G A T T G C A C T A G G T A C G C T A C G T A
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PH0112.1_Nkx2-3/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAGTACTTAGCAA
CNTTAAGTACTTAANG-
 A C G T C T A G A T G C G A T C C G T A G C T A A T C G A C G T G C T A A G T C C A G T C G A T T G C A C T A G G T A C G C T A C G T A
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCCAAGTACTTAGCAA----
-----CCGCATAGCAACGGA
 C T A G A T G C G A T C C G T A G C T A A T C G A C G T G C T A A G T C C A G T C G A T T G C A C T A G G T A C G C T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGTACTTAGCAA--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T C T A G A T G C G A T C C G T A G C T A A T C G A C G T G C T A A G T C C A G T C G A T T G C A C T A G G T A C G C T A C G T A A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCCAAGTACTTAGCAA----
-----TACCATAGCAACGGT
 C T A G A T G C G A T C C G T A G C T A A T C G A C G T G C T A A G T C C A G T C G A T T G C A C T A G G T A C G C T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGTACTTAGCAA
AAGGCAAGTGT-------
 A C G T A C G T C T A G A T G C G A T C C G T A G C T A A T C G A C G T G C T A A G T C C A G T C G A T T G C A C T A G G T A C G C T A C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGTACTTAGCAA
CGTGCCAAG----------
 A C G T A C G T A C G T C T A G A T G C G A T C C G T A G C T A A T C G A C G T G C T A A G T C C A G T C G A T T G C A C T A G G T A C G C T A C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAGTACTTAGCAA
TGCCAA-----------
 A C G T C T A G A T G C G A T C C G T A G C T A A T C G A C G T G C T A A G T C C A G T C G A T T G C A C T A G G T A C G C T A C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGTACTTAGCAA
GGTGCCAAGT---------
 A C G T A C G T A C G T C T A G A T G C G A T C C G T A G C T A A T C G A C G T G C T A A G T C C A G T C G A T T G C A C T A G G T A C G C T A C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T