Information for 7-GASTAAAGWYCAA (Motif 6)

A C T G C G T A A T C G G A C T G T C A C G T A C G T A A C T G C G A T A G C T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C T G A G C A T A G T C A C G T A C G T A C G T C G T A A T G C A C G T A G T C
p-value:1e-13
log p-value:-3.049e+01
Information Content per bp:1.886
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.9 +/- 19.6bp
Average Position of motif in Background30.9 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GASTAAAGWYCAA---
GGCAAAAGTCCAATAA
 A C T G C G T A A T C G G A C T G T C A C G T A C G T A A C T G C G A T A G C T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GASTAAAGWYCAA
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A C T G C G T A A T C G G A C T G T C A C G T A C G T A A C T G C G A T A G C T A G T C C G T A C G T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GASTAAAGWYCAA
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C T G C G T A A T C G G A C T G T C A C G T A C G T A A C T G C G A T A G C T A G T C C G T A C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GASTAAAGWYCAA
ANGNAAAGGTCA-
 A C T G C G T A A T C G G A C T G T C A C G T A C G T A A C T G C G A T A G C T A G T C C G T A C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GASTAAAGWYCAA---
----AAAGATCAAAGG
 A C T G C G T A A T C G G A C T G T C A C G T A C G T A A C T G C G A T A G C T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GASTAAAGWYCAA---
TCTCAAAGGTCACGAG
 A C T G C G T A A T C G G A C T G T C A C G T A C G T A A C T G C G A T A G C T A G T C C G T A C G T A A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GASTAAAGWYCAA---
TCTCAAAGGTCACCTG
 A C T G C G T A A T C G G A C T G T C A C G T A C G T A A C T G C G A T A G C T A G T C C G T A C G T A A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GASTAAAGWYCAA------
----AAAGATCAAAGGGTT
 A C T G C G T A A T C G G A C T G T C A C G T A C G T A A C T G C G A T A G C T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GASTAAAGWYCAA-
GGGGTCAAAGTCCAAT
 A C G T A C G T A C T G C G T A A T C G G A C T G T C A C G T A C G T A A C T G C G A T A G C T A G T C C G T A C G T A A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GASTAAAGWYCAA
TAGGGCAAAGGTCA-
 A C G T A C G T A C T G C G T A A T C G G A C T G T C A C G T A C G T A A C T G C G A T A G C T A G T C C G T A C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T