Information for 9-GAAATGTGAWAGG (Motif 11)

A C T G C G T A C T G A C G T A A C G T A C T G A C G T A C T G C G T A C G A T C G T A A C T G A C T G
Reverse Opposite:
A G T C G T A C A C G T G C A T A C G T A G T C C G T A A G T C C G T A A C G T A G C T C G A T A G T C
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.892
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 31.6bp
Average Position of motif in Background36.8 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAAATGTGAWAGG
GWAAYHTGABMC-
 A C T G C G T A C T G A C G T A A C G T A C T G A C G T A C T G C G T A C G A T C G T A A C T G A C T G
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAAATGTGAWAGG
GWAAYHTGAKMC-
 A C T G C G T A C T G A C G T A A C G T A C T G A C G T A C T G C G T A C G A T C G T A A C T G A C T G
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAATGTGAWAGG--
AGAAAGTGAAAGTGA
 A C T G C G T A C T G A C G T A A C G T A C T G A C G T A C T G C G T A C G A T C G T A A C T G A C T G A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAAATGTGAWAGG
-AGGTGTGAAA--
 A C T G C G T A C T G A C G T A A C G T A C T G A C G T A C T G C G T A C G A T C G T A A C T G A C T G
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAAATGTGAWAGG
-GAAAGTGAAAGT
 A C T G C G T A C T G A C G T A A C G T A C T G A C G T A C T G C G T A C G A T C G T A A C T G A C T G
A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAAATGTGAWAGG
-AGGTGTGAAM--
 A C T G C G T A C T G A C G T A A C G T A C T G A C G T A C T G C G T A C G A T C G T A A C T G A C T G
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAATGTGAWAGG
AAGGTGTGAAAAT
 A C T G C G T A C T G A C G T A A C G T A C T G A C G T A C T G C G T A C G A T C G T A A C T G A C T G
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAATGTGAWAGG
-AGGTGTGA----
 A C T G C G T A C T G A C G T A A C G T A C T G A C G T A C T G C G T A C G A T C G T A A C T G A C T G
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAAATGTGAWAGG
NTGGAATGTG-----
 A C G T A C G T A C T G C G T A C T G A C G T A A C G T A C T G A C G T A C T G C G T A C G A T C G T A A C T G A C T G
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAATGTGAWAGG-----
GGAAAGCGAAACCAAAAC
 A C T G C G T A C T G A C G T A A C G T A C T G A C G T A C T G C G T A C G A T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C