Information for 1-NNTGTTTACWYAB (Motif 1)

A C G T G C T A A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C T G
Reverse Opposite:
T G A C G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G A T T C G A
p-value:1e-333
log p-value:-7.671e+02
Information Content per bp:1.610
Number of Target Sequences with motif427.0
Percentage of Target Sequences with motif54.19%
Number of Background Sequences with motif2281.9
Percentage of Background Sequences with motif4.89%
Average Position of motif in Targets51.0 +/- 22.0bp
Average Position of motif in Background49.9 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-NNTGTTTACWYAB-
BSNTGTTTACWYWGN
 A C G T A C G T G C T A A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C T G A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--NNTGTTTACWYAB
TCCATGTTTACTTTG
 A C G T A C G T A C G T G C T A A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C T G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.97
Offset:2
Orientation:forward strand
Alignment:NNTGTTTACWYAB-
--TGTTTACTTAGG
 A C G T G C T A A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C T G A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.96
Offset:2
Orientation:forward strand
Alignment:NNTGTTTACWYAB
--TRTTTACTTW-
 A C G T G C T A A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C T G
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:NNTGTTTACWYAB
--TGTTTACTTT-
 A C G T G C T A A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C T G
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.96
Offset:0
Orientation:forward strand
Alignment:NNTGTTTACWYAB
CNTGTTTACATA-
 A C G T G C T A A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C T G
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:NNTGTTTACWYAB
--TGTTTACTTT-
 A C G T G C T A A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C T G
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:NNTGTTTACWYAB
-ATATTTACATA-
 A C G T G C T A A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C T G
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:NNTGTTTACWYAB
TTTGTTTACTTA-
 A C G T G C T A A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C T G
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:NNTGTTTACWYAB----
NSTGTTTRCWCAGBNNN
 A C G T G C T A A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A A G C T C G T A A C T G A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G