Information for 1-NNHTGTTTACTTWDNN (Motif 1)

G A T C G T A C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C A T G A G T C C T G A
Reverse Opposite:
G A C T T A C G G T A C G C A T T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A C A G T C T A G
p-value:1e-307
log p-value:-7.089e+02
Information Content per bp:1.573
Number of Target Sequences with motif475.0
Percentage of Target Sequences with motif60.66%
Number of Background Sequences with motif3684.2
Percentage of Background Sequences with motif7.91%
Average Position of motif in Targets51.3 +/- 21.9bp
Average Position of motif in Background50.4 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.98
Offset:3
Orientation:reverse strand
Alignment:NNHTGTTTACTTWDNN
---TGTTTACTTT---
 G A T C G T A C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C A T G A G T C C T G A
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.98
Offset:3
Orientation:reverse strand
Alignment:NNHTGTTTACTTWDNN
---TGTTTACTTT---
 G A T C G T A C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C A T G A G T C C T G A
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.98
Offset:3
Orientation:forward strand
Alignment:NNHTGTTTACTTWDNN
---TRTTTACTTW---
 G A T C G T A C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C A T G A G T C C T G A
A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-NNHTGTTTACTTWDNN
TCCATGTTTACTTTG--
 A C G T G A T C G T A C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C A T G A G T C C T G A
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.96
Offset:3
Orientation:forward strand
Alignment:NNHTGTTTACTTWDNN
---TGTTTACTTAGG-
 G A T C G T A C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C A T G A G T C C T G A
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:6
Score:0.96
Offset:0
Orientation:forward strand
Alignment:NNHTGTTTACTTWDNN
BSNTGTTTACWYWGN-
 G A T C G T A C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C A T G A G T C C T G A
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:NNHTGTTTACTTWDNN
-TTTGTTTACTTA---
 G A T C G T A C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C A T G A G T C C T G A
A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NNHTGTTTACTTWDNN
-CNTGTTTACATA---
 G A T C G T A C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C A T G A G T C C T G A
A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:NNHTGTTTACTTWDNN--
-NSTGTTTRCWCAGBNNN
 G A T C G T A C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C A T G A G T C C T G A A C G T A C G T
A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:NNHTGTTTACTTWDNN
--ATATTTACATA---
 G A T C G T A C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C A T A G C T C G T A C A T G A G T C C T G A
A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T A C G T A C G T