p-value: | 1e-6 |
log p-value: | -1.400e+01 |
Information Content per bp: | 1.924 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.39% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 63.6 +/- 7.7bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0006.1_Barhl2/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TAAAGCCAATTTACTT AAAAACCAATTAAGAA |
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PH0108.1_Msx3/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TAAAGCCAATTTACTT CAAAACCAATTAATTT |
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PH0074.1_Hoxd1/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TAAAGCCAATTTACTT- NNNAGCTAATTAGCTTA |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TAAAGCCAATTTACTT- -TAAGCCACTTGAAATT |
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PH0005.1_Barhl1/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TAAAGCCAATTTACTT AACAACCAATTAATTC |
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Nr2e1/MA0676.1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TAAAGCCAATTTACTT AAAAGTCAA------- |
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PH0114.1_Nkx2-5/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TAAAGCCAATTTACTT- -TAAGCCACTTGAATTT |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TAAAGCCAATTTACTT- -TAAGCCACTTAACATT |
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PH0171.1_Nkx2-1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TAAAGCCAATTTACTT- -TAAGCCACTTGAAATT |
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PH0094.1_Lhx4/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TAAAGCCAATTTACTT- CAAAGCTAATTAGNTTN |
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