Information for 9-SYTGYCCMAACAA (Motif 11)

A T G C A G C T A C G T A C T G A G C T A G T C A G T C G T C A C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A C G T A C T G C T A G C T G A G T A C C G T A C T G A A T C G
p-value:1e-10
log p-value:-2.454e+01
Information Content per bp:1.873
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.0 +/- 20.6bp
Average Position of motif in Background35.5 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:SYTGYCCMAACAA----
AACACCAAAACAAAGGA
 A T G C A G C T A C G T A C T G A G C T A G T C A G T C G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.65
Offset:8
Orientation:reverse strand
Alignment:SYTGYCCMAACAA-
--------AACAAT
 A T G C A G C T A C G T A C T G A G C T A G T C A G T C G T C A C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:SYTGYCCMAACAA-
-------NAACAAT
 A T G C A G C T A C G T A C T G A G C T A G T C A G T C G T C A C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:SYTGYCCMAACAA----
-ATATCAAAACAAAACA
 A T G C A G C T A C G T A C T G A G C T A G T C A G T C G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---SYTGYCCMAACAA-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A T G C A G C T A C G T A C T G A G C T A G T C A G T C G T C A C G T A C G T A A G T C C G T A C G T A A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:SYTGYCCMAACAA---
------RNAACAATGG
 A T G C A G C T A C G T A C T G A G C T A G T C A G T C G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:SYTGYCCMAACAA------
--TCACGGAACAATAGGTG
 A T G C A G C T A C G T A C T G A G C T A G T C A G T C G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:SYTGYCCMAACAA---
-ATGTCACAACAACAC
 A T G C A G C T A C G T A C T G A G C T A G T C A G T C G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:SYTGYCCMAACAA-
-----GTAAACAAT
 A T G C A G C T A C G T A C T G A G C T A G T C A G T C G T C A C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:SYTGYCCMAACAA---
------VRAACAATGG
 A T G C A G C T A C G T A C T G A G C T A G T C A G T C G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G