Information for 6-AATATTTGAYCAA (Motif 8)

T C G A C G T A A C G T T C G A A G C T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T C T A G T C A G C G A T A G T C C G T A C G T A C T G A A C G T C G T A A C G T A C G T
p-value:1e-13
log p-value:-3.157e+01
Information Content per bp:1.837
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.9 +/- 22.6bp
Average Position of motif in Background75.1 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AATATTTGAYCAA
TTAATGTTTAACC--
 A C G T A C G T T C G A C G T A A C G T T C G A A G C T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C T G A
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T A C G T

PH0016.1_Cux1_1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AATATTTGAYCAA----
ACCGGTTGATCACCTGA
 T C G A C G T A A C G T T C G A A G C T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C T G A A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

PB0082.1_Tcf3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AATATTTGAYCAA--
NNTTCCTTTGATCTANA
 A C G T A C G T T C G A C G T A A C G T T C G A A G C T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C T G A A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATATTTGAYCAA--
ATTTCCTTTGATCTATA
 A C G T A C G T T C G A C G T A A C G T T C G A A G C T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C T G A A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATATTTGAYCAA--
AATCCCTTTGATCTATC
 A C G T A C G T T C G A C G T A A C G T T C G A A G C T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C T G A A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

POU4F3/MA0791.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AATATTTGAYCAA
ATGCATAATTAATGAG
 A C G T A C G T A C G T T C G A C G T A A C G T T C G A A G C T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C T G A
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

PB0001.1_Arid3a_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AATATTTGAYCAA----
NNNTTTTAATTAANNNN
 T C G A C G T A A C G T T C G A A G C T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C T G A A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AATATTTGAYCAA
--TAATTGATTA-
 T C G A C G T A A C G T T C G A A G C T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C T G A
A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AATATTTGAYCAA
----TTTAAT---
 T C G A C G T A A C G T T C G A A G C T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C T G A
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AATATTTGAYCAA
NNTNNCAATATTAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A C G T T C G A A G C T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C T G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T