Information for 4-TTTGKKGACACAG (Motif 4)

A G C T A C G T C G A T T C A G A C G T A C G T A C T G C G T A A G T C C G T A G T A C C G T A C A T G
Reverse Opposite:
G T A C A C G T A C T G C G A T A C T G C G A T G T A C G T C A T G C A A G T C C G T A T G C A C T G A
p-value:1e-20
log p-value:-4.728e+01
Information Content per bp:1.696
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif6.31%
Number of Background Sequences with motif404.4
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets47.2 +/- 26.1bp
Average Position of motif in Background52.3 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTGKKGACACAG----
NSTGTTTRCWCAGBNNN
 A G C T A C G T C G A T T C A G A C G T A C G T A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTTGKKGACACAG
--ARNTGACA---
 A G C T A C G T C G A T T C A G A C G T A C G T A C T G C G T A A G T C C G T A G T A C C G T A C A T G
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTTGKKGACACAG
CNTGTTTACATA-
 A G C T A C G T C G A T T C A G A C G T A C G T A C T G C G T A A G T C C G T A G T A C C G T A C A T G
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTTGKKGACACAG-
BSNTGTTTACWYWGN
 A C G T A G C T A C G T C G A T T C A G A C G T A C G T A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TTTGKKGACACAG
-------ACAAAG
 A G C T A C G T C G A T T C A G A C G T A C G T A C T G C G T A A G T C C G T A G T A C C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTTGKKGACACAG-
--TGTTTACTTAGG
 A G C T A C G T C G A T T C A G A C G T A C G T A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTTGKKGACACAG
---RHTGWCAR--
 A G C T A C G T C G A T T C A G A C G T A C G T A C T G C G T A A G T C C G T A G T A C C G T A C A T G
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTGKKGACACAG--
NTNNNGGGGTCANGNNN
 A C G T A C G T A G C T A C G T C G A T T C A G A C G T A C G T A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTTGKKGACACAG-
----GGAACAAAGR
 A G C T A C G T C G A T T C A G A C G T A C G T A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T
A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0041.1_Mafb_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTTGKKGACACAG-
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T A G C T A C G T C G A T T C A G A C G T A C G T A C T G C G T A A G T C C G T A G T A C C G T A C A T G A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C