Information for 12-CAGAGAACTTGGT (Motif 16)

G T A C C G T A A T C G C G T A A C T G C T G A C G T A A G T C A C G T A C G T A C T G A C T G A G C T
Reverse Opposite:
C T G A A G T C G T A C C G T A C G T A A C T G A C G T A G C T A G T C A C G T A T G C A C G T A C T G
p-value:1e-9
log p-value:-2.268e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.2 +/- 8.3bp
Average Position of motif in Background64.1 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGAACTTGGT--
TTCNAAGTACTTNNNNN
 A C G T A C G T G T A C C G T A A T C G C G T A A C T G C T G A C G T A A G T C A C G T A C G T A C T G A C T G A G C T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

MAX::MYC/MA0059.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGAGAACTTGGT
--GACCACGTGGT
 G T A C C G T A A T C G C G T A A C T G C T G A C G T A A G T C A C G T A C G T A C T G A C T G A G C T
A C G T A C G T C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGAGAACTTGGT
-AGGVNCCTTTGT
 G T A C C G T A A T C G C G T A A C T G C T G A C G T A A G T C A C G T A C G T A C T G A C T G A G C T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Sox11/MA0869.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGAACTTGGT
AACACTGAAATTGTT
 A C G T A C G T G T A C C G T A A T C G C G T A A C T G C T G A C G T A A G T C A C G T A C G T A C T G A C T G A G C T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGAGAACTTGGT
-ACAGGATGTGGT
 G T A C C G T A A T C G C G T A A C T G C T G A C G T A A G T C A C G T A C G T A C T G A C T G A G C T
A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGAGAACTTGGT
--CTGACCTTTG-
 G T A C C G T A A T C G C G T A A C T G C T G A C G T A A G T C A C G T A C G T A C T G A C T G A G C T
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAGAGAACTTGGT-----
---TGGACTTTGNNCTCN
 G T A C C G T A A T C G C G T A A C T G C T G A C G T A A G T C A C G T A C G T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Myc/MA0147.2/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGAGAACTTGGT
--AAGCACATGG-
 G T A C C G T A A T C G C G T A A C T G C T G A C G T A A G T C A C G T A C G T A C T G A C T G A G C T
A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T

Stat6/MA0520.1/Jaspar

Match Rank:9
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CAGAGAACTTGGT
CATTTCCTGAGAAAT----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A T C G C G T A A C T G C T G A C G T A A G T C A C G T A C G T A C T G A C T G A G C T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T A C G T A C G T A C G T A C G T

PB0043.1_Max_1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGAACTTGGT--
CCNNANCACGTGGTCN
 A C G T G T A C C G T A A T C G C G T A A C T G C T G A C G T A A G T C A C G T A C G T A C T G A C T G A G C T A C G T A C G T
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A