Information for 8-CACAGYGAGSTCTTTA (Motif 12)

A T G C C G T A A T G C C G T A C T A G A G T C T A C G C G T A A C T G A T G C A C G T A G T C C G A T A C G T A G C T T C G A
Reverse Opposite:
A G C T C T G A G T C A C G T A C T A G G T C A A T C G T A G C A C G T A G T C C T A G A G T C C G A T A T C G A C G T A T C G
p-value:1e-11
log p-value:-2.705e+01
Information Content per bp:1.707
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif15.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.9 +/- 22.9bp
Average Position of motif in Background47.7 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CACAGYGAGSTCTTTA
GVACAGNMTGTYCTB--
 A C G T A T G C C G T A A T G C C G T A C T A G A G T C T A C G C G T A A C T G A T G C A C G T A G T C C G A T A C G T A G C T T C G A
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CACAGYGAGSTCTTTA
-ACAAAGGNBCCT---
 A T G C C G T A A T G C C G T A C T A G A G T C T A C G C G T A A C T G A T G C A C G T A G T C C G A T A C G T A G C T T C G A
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CACAGYGAGSTCTTTA
CACAGN----------
 A T G C C G T A A T G C C G T A C T A G A G T C T A C G C G T A A C T G A T G C A C G T A G T C C G A T A C G T A G C T T C G A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CACAGYGAGSTCTTTA--
-NNNNTGAGCACTGTNNG
 A T G C C G T A A T G C C G T A C T A G A G T C T A C G C G T A A C T G A T G C A C G T A G T C C G A T A C G T A G C T T C G A A C G T A C G T
A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CACAGYGAGSTCTTTA-----
----GCAACCTCATTATNNNN
 A T G C C G T A A T G C C G T A C T A G A G T C T A C G C G T A A C T G A T G C A C G T A G T C C G A T A C G T A G C T T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CACAGYGAGSTCTTTA-
-------AGCTCATTAT
 A T G C C G T A A T G C C G T A C T A G A G T C T A C G C G T A A C T G A T G C A C G T A G T C C G A T A C G T A G C T T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CACAGYGAGSTCTTTA--
-NNNCTGATATCTCNNNN
 A T G C C G T A A T G C C G T A C T A G A G T C T A C G C G T A A C T G A T G C A C G T A G T C C G A T A C G T A G C T T C G A A C G T A C G T
A C G T T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

RARA::RXRA/MA0159.1/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CACAGYGAGSTCTTTA
AGGTCACGGAGAGGTCA---
 A C G T A C G T A C G T A C G T A T G C C G T A A T G C C G T A C T A G A G T C T A C G C G T A A C T G A T G C A C G T A G T C C G A T A C G T A G C T T C G A
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CACAGYGAGSTCTTTA
AGNACAGNCTGTTCTN--
 A C G T A C G T A T G C C G T A A T G C C G T A C T A G A G T C T A C G C G T A A C T G A T G C A C G T A G T C C G A T A C G T A G C T T C G A
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CACAGYGAGSTCTTTA-----
----NNNACCTCATTATCNTN
 A T G C C G T A A T G C C G T A C T A G A G T C T A C G C G T A A C T G A T G C A C G T A G T C C G A T A C G T A G C T T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C