Information for 3-CTGTTCTTACCTT (Motif 8)

A G T C A C G T A C T G A C G T A G C T A G T C A G C T G C A T G T C A T A G C T A G C A G C T C G A T
Reverse Opposite:
G C T A C T G A A C T G A C T G C A G T C G T A C T G A C T A G C T G A C G T A A G T C C G T A A C T G
p-value:1e-13
log p-value:-3.007e+01
Information Content per bp:1.779
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif46.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets39.1 +/- 28.0bp
Average Position of motif in Background53.0 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTGTTCTTACCTT
--NNACTTACCTN
 A G T C A C G T A C T G A C G T A G C T A G T C A G C T G C A T G T C A T A G C T A G C A G C T C G A T
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGTTCTTACCTT
CTGTTCCTGG---
 A G T C A C G T A C T G A C G T A G C T A G T C A G C T G C A T G T C A T A G C T A G C A G C T C G A T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTGTTCTTACCTT--
CTTTGTTTACTTTTN
 A G T C A C G T A C T G A C G T A G C T A G T C A G C T G C A T G T C A T A G C T A G C A G C T C G A T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGTTCTTACCTT
GCTGTG--------
 A C G T A G T C A C G T A C T G A C G T A G C T A G T C A G C T G C A T G T C A T A G C T A G C A G C T C G A T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGTTCTTACCTT
GTNTTGTTGTGANNT-
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G C T A G T C A G C T G C A T G T C A T A G C T A G C A G C T C G A T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTGTTCTTACCTT-
---TTCTTATCTGT
 A G T C A C G T A C T G A C G T A G C T A G T C A G C T G C A T G T C A T A G C T A G C A G C T C G A T A C G T
A C G T A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTGTTCTTACCTT
----TCTTATCT-
 A G T C A C G T A C T G A C G T A G C T A G T C A G C T G C A T G T C A T A G C T A G C A G C T C G A T
A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTGTTCTTACCTT
GCTGTGGTTT----
 A C G T A G T C A C G T A C T G A C G T A G C T A G T C A G C T G C A T G T C A T A G C T A G C A G C T C G A T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTGTTCTTACCTT--
NNNTTTGTTTACATTTN
 A C G T A C G T A G T C A C G T A C T G A C G T A G C T A G T C A G C T G C A T G T C A T A G C T A G C A G C T C G A T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTGTTCTTACCTT--
NNNTTTGTTTACATTTN
 A C G T A C G T A G T C A C G T A C T G A C G T A G C T A G T C A G C T G C A T G T C A T A G C T A G C A G C T C G A T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T