Information for 5-SCCATTGTSTCATCCA (Motif 7)

A T G C G T A C G T A C G C T A A G C T A C G T A T C G C A G T A T C G A C G T A G T C T G C A A C G T G A T C A G T C G T C A
Reverse Opposite:
A C G T A C T G C T A G G T C A A C G T A C T G G T C A A T G C G C T A T A G C G T C A T C G A C A G T A C T G A C T G T A C G
p-value:1e-13
log p-value:-3.023e+01
Information Content per bp:1.707
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.2 +/- 23.8bp
Average Position of motif in Background44.4 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:SCCATTGTSTCATCCA
-WCATTTTGKCCTCYT
 A T G C G T A C G T A C G C T A A G C T A C G T A T C G C A G T A T C G A C G T A G T C T G C A A C G T G A T C A G T C G T C A
A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--SCCATTGTSTCATCCA
NNNCCATTGTGTNAN---
 A C G T A C G T A T G C G T A C G T A C G C T A A G C T A C G T A T C G C A G T A T C G A C G T A G T C T G C A A C G T G A T C A G T C G T C A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:SCCATTGTSTCATCCA
-CCTTTGTT-------
 A T G C G T A C G T A C G C T A A G C T A C G T A T C G C A G T A T C G A C G T A G T C T G C A A C G T G A T C A G T C G T C A
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:SCCATTGTSTCATCCA
-CCATTGTTYB-----
 A T G C G T A C G T A C G C T A A G C T A C G T A T C G C A G T A T C G A C G T A G T C T G C A A C G T G A T C A G T C G T C A
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:SCCATTGTSTCATCCA
-CCATTGTTTT-----
 A T G C G T A C G T A C G C T A A G C T A C G T A T C G C A G T A T C G A C G T A G T C T G C A A C G T G A T C A G T C G T C A
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:SCCATTGTSTCATCCA
NCCATTGTTY------
 A T G C G T A C G T A C G C T A A G C T A C G T A T C G C A G T A T C G A C G T A G T C T G C A A C G T G A T C A G T C G T C A
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----SCCATTGTSTCATCCA
TGTTCCCATTGTGTACT---
 A C G T A C G T A C G T A C G T A T G C G T A C G T A C G C T A A G C T A C G T A T C G C A G T A T C G A C G T A G T C T G C A A C G T G A T C A G T C G T C A
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:SCCATTGTSTCATCCA
-CCWTTGTY-------
 A T G C G T A C G T A C G C T A A G C T A C G T A T C G C A G T A T C G A C G T A G T C T G C A A C G T G A T C A G T C G T C A
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:SCCATTGTSTCATCCA
CTCATTGTC-------
 A T G C G T A C G T A C G C T A A G C T A C G T A T C G C A G T A T C G A C G T A G T C T G C A A C G T G A T C A G T C G T C A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:SCCATTGTSTCATCCA
-CCWTTGTYYB-----
 A T G C G T A C G T A C G C T A A G C T A C G T A T C G C A G T A T C G A C G T A G T C T G C A A C G T G A T C A G T C G T C A
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T