Information for 4-CGVAGTTTCAGAGATG (Motif 6)

A T G C A C T G T G A C C G T A A T C G A C G T A G C T C A G T A G T C C T G A A C T G C T G A A T C G C G T A C G A T A C T G
Reverse Opposite:
A G T C G C T A A C G T T A G C A G C T G T A C A G C T A C T G G C T A C T G A C G T A T A G C A C G T A C T G T G A C A T C G
p-value:1e-13
log p-value:-3.133e+01
Information Content per bp:1.742
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.1 +/- 31.7bp
Average Position of motif in Background53.4 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGVAGTTTCAGAGATG
--TGGTTTCAGT----
 A T G C A C T G T G A C C G T A A T C G A C G T A G C T C A G T A G T C C T G A A C T G C T G A A T C G C G T A C G A T A C T G
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGVAGTTTCAGAGATG-
--CATTTCCTGAGAAAT
 A T G C A C T G T G A C C G T A A T C G A C G T A G C T C A G T A G T C C T G A A C T G C T G A A T C G C G T A C G A T A C T G A C G T
A C G T A C G T A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGVAGTTTCAGAGATG
--CGGTTTCAAA----
 A T G C A C T G T G A C C G T A A T C G A C G T A G C T C A G T A G T C C T G A A C T G C T G A A T C G C G T A C G A T A C T G
A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CGVAGTTTCAGAGATG-
-----TTTCTNAGAAAN
 A T G C A C T G T G A C C G T A A T C G A C G T A G C T C A G T A G T C C T G A A C T G C T G A A T C G C G T A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CGVAGTTTCAGAGATG
TNTAATTTGCATACNA-
 A C G T A T G C A C T G T G A C C G T A A T C G A C G T A G C T C A G T A G T C C T G A A C T G C T G A A T C G C G T A C G A T A C T G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CGVAGTTTCAGAGATG
TNTAATTTGCATACNA-
 A C G T A T G C A C T G T G A C C G T A A T C G A C G T A G C T C A G T A G T C C T G A A C T G C T G A A T C G C G T A C G A T A C T G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CGVAGTTTCAGAGATG
TNGAATTTCATTNAN-
 A T G C A C T G T G A C C G T A A T C G A C G T A G C T C A G T A G T C C T G A A C T G C T G A A T C G C G T A C G A T A C T G
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CGVAGTTTCAGAGATG
-----TTCCKNAGAA-
 A T G C A C T G T G A C C G T A A T C G A C G T A G C T C A G T A G T C C T G A A C T G C T G A A T C G C G T A C G A T A C T G
A C G T A C G T A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CGVAGTTTCAGAGATG
--AGGTGHCAGACA--
 A T G C A C T G T G A C C G T A A T C G A C G T A G C T C A G T A G T C C T G A A C T G C T G A A T C G C G T A C G A T A C T G
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CGVAGTTTCAGAGATG--
--------CAGATAAGGN
 A T G C A C T G T G A C C G T A A T C G A C G T A G C T C A G T A G T C C T G A A C T G C T G A A T C G C G T A C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A