Information for 3-TCYCWTGACMCAGGGC (Motif 5)

A C G T A T G C A G C T T G A C G C T A C A G T A C T G C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C T G G T A C
Reverse Opposite:
A C T G G T A C A G T C A G T C A C G T C T A G A C G T A C T G A G C T A G T C G T C A C G A T A C T G T C G A A T C G G T C A
p-value:1e-13
log p-value:-3.133e+01
Information Content per bp:1.780
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 23.0bp
Average Position of motif in Background75.0 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCYCWTGACMCAGGGC--
----CCGCCCAAGGGCAG
 A C G T A T G C A G C T T G A C G C T A C A G T A C T G C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCYCWTGACMCAGGGC-
---TAGGGCAAAGGTCA
 A C G T A T G C A G C T T G A C G C T A C A G T A C T G C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TCYCWTGACMCAGGGC-
-----TGCCCCAGGGCA
 A C G T A T G C A G C T T G A C G C T A C A G T A C T G C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TCYCWTGACMCAGGGC--
----TTGCCCTAGGGCAT
 A C G T A T G C A G C T T G A C G C T A C A G T A C T G C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:TCYCWTGACMCAGGGC
--------CACAGN--
 A C G T A T G C A G C T T G A C G C T A C A G T A C T G C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TCYCWTGACMCAGGGC-
-----TGCCCTNGGGCA
 A C G T A T G C A G C T T G A C G C T A C A G T A C T G C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TCYCWTGACMCAGGGC--
------GCCTCAGGGCAT
 A C G T A T G C A G C T T G A C G C T A C A G T A C T G C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TCYCWTGACMCAGGGC-
-----TGCCCNGGGGCA
 A C G T A T G C A G C T T G A C G C T A C A G T A C T G C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCYCWTGACMCAGGGC-
--GTAGGGCAAAGGTCA
 A C G T A T G C A G C T T G A C G C T A C A G T A C T G C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C T G G T A C A C G T
A C G T A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCYCWTGACMCAGGGC--
--NNAGGGACAAGGGCNC
 A C G T A T G C A G C T T G A C G C T A C A G T A C T G C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C T G G T A C A C G T A C G T
A C G T A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C