Information for 13-TACTMCCCCC (Motif 47)

A C G T C G T A T A G C A C G T G T C A A G T C T A G C A G T C A G T C G T A C
Reverse Opposite:
A C T G C T A G A C T G A T C G A C T G A C G T C G T A A T C G A C G T G T C A
p-value:1e-5
log p-value:-1.278e+01
Information Content per bp:1.810
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif133.8
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets54.8 +/- 22.7bp
Average Position of motif in Background47.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0122.1_Obox2/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TACTMCCCCC--
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C A C G T G T C A A G T C T A G C A G T C A G T C G T A C A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

PH0123.1_Obox3/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TACTMCCCCC--
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C A C G T G T C A A G T C T A G C A G T C A G T C G T A C A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0139.1_Pitx3/Jaspar

Match Rank:3
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------TACTMCCCCC
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C A C G T G T C A A G T C T A G C A G T C A G T C G T A C
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PH0121.1_Obox1/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TACTMCCCCC--
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C A C G T G T C A A G T C T A G C A G T C A G T C G T A C A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TACTMCCCCC-
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C A C G T G T C A A G T C T A G C A G T C A G T C G T A C A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TACTMCCCCC----
NRGCCCCRCCCHBNN
 A C G T A C G T C G T A T A G C A C G T G T C A A G T C T A G C A G T C A G T C G T A C A C G T A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TACTMCCCCC--
AGGCTAATCCCCAANG
 A C G T A C G T A C G T A C G T A C G T C G T A T A G C A C G T G T C A A G T C T A G C A G T C A G T C G T A C A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TACTMCCCCC--
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C A C G T G T C A A G T C T A G C A G T C A G T C G T A C A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TACTMCCCCC
GCTAATCCCC--
 A C G T A C G T A C G T C G T A T A G C A C G T G T C A A G T C T A G C A G T C A G T C G T A C
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TACTMCCCCC
CCTAATCCGC--
 A C G T A C G T A C G T C G T A T A G C A C G T G T C A A G T C T A G C A G T C A G T C G T A C
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T