Information for 22-TTGGTCTCCTAGT (Motif 42)

C G A T C A G T C T A G A C T G A G C T G A T C A C G T A T G C T A G C G C A T C T G A A T C G C G A T
Reverse Opposite:
G C T A T A G C G A C T C G T A A T C G T A C G C G T A C T A G T C G A T G A C A G T C G T C A C G T A
p-value:1e-6
log p-value:-1.535e+01
Information Content per bp:1.662
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.05%
Number of Background Sequences with motif421.1
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets42.2 +/- 26.3bp
Average Position of motif in Background48.5 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTGGTCTCCTAGT--
NTNNCGTATCCAAGTNN
 A C G T A C G T C G A T C A G T C T A G A C T G A G C T G A T C A C G T A T G C T A G C G C A T C T G A A T C G C G A T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTGGTCTCCTAGT--
GATAACATCCTAGTAG
 A C G T C G A T C A G T C T A G A C T G A G C T G A T C A C G T A T G C T A G C G C A T C T G A A T C G C G A T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTGGTCTCCTAGT
GCTCGGSCTC-----
 A C G T A C G T C G A T C A G T C T A G A C T G A G C T G A T C A C G T A T G C T A G C G C A T C T G A A T C G C G A T
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTGGTCTCCTAGT--
TACGAGACTCCTCTAAC
 A C G T A C G T C G A T C A G T C T A G A C T G A G C T G A T C A C G T A T G C T A G C G C A T C T G A A T C G C G A T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTGGTCTCCTAGT----
--TGTTKCCTAGCAACM
 C G A T C A G T C T A G A C T G A G C T G A T C A C G T A T G C T A G C G C A T C T G A A T C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PB0158.1_Rfx3_2/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TTGGTCTCCTAGT------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T C G A T C A G T C T A G A C T G A G C T G A T C A C G T A T G C T A G C G C A T C T G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TTGGTCTCCTAGT-----
----TTTCCTAGAAAGCA
 C G A T C A G T C T A G A C T G A G C T G A T C A C G T A T G C T A G C G C A T C T G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TTGGTCTCCTAGT------
----TTTCCTGGAAAGNNN
 C G A T C A G T C T A G A C T G A G C T G A T C A C G T A T G C T A G C G C A T C T G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TTGGTCTCCTAGT
CNGTCCTCCC---
 C G A T C A G T C T A G A C T G A G C T G A T C A C G T A T G C T A G C G C A T C T G A A T C G C G A T
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TTGGTCTCCTAGT
---ACATCCTGNT
 C G A T C A G T C T A G A C T G A G C T G A T C A C G T A T G C T A G C G C A T C T G A A T C G C G A T
A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T