Information for 2-GCAGAGTTTTTCC (Motif 4)

A C T G T A G C G T C A A C T G C T G A C A T G A C G T A G C T A G C T A G C T C G A T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C T G A C T G A C T G A G T C A G A T C A G C T A G T C A C G T A C T G A G T C
p-value:1e-14
log p-value:-3.263e+01
Information Content per bp:1.790
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif16.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets32.6 +/- 23.0bp
Average Position of motif in Background52.2 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC3/MA0625.1/Jaspar

Match Rank:1
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GCAGAGTTTTTCC---
------ATTTTCCATT
 A C T G T A G C G T C A A C T G C T G A C A T G A C G T A G C T A G C T A G C T C G A T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GCAGAGTTTTTCC---
------ATTTTCCATT
 A C T G T A G C G T C A A C T G C T G A C A T G A C G T A G C T A G C T A G C T C G A T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCAGAGTTTTTCC
---GGGGATTTCC
 A C T G T A G C G T C A A C T G C T G A C A T G A C G T A G C T A G C T A G C T C G A T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.63
Offset:7
Orientation:forward strand
Alignment:GCAGAGTTTTTCC-
-------TTTTCCA
 A C T G T A G C G T C A A C T G C T G A C A T G A C G T A G C T A G C T A G C T C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GCAGAGTTTTTCC---
------ATTTTCCATT
 A C T G T A G C G T C A A C T G C T G A C A T G A C G T A G C T A G C T A G C T C G A T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCAGAGTTTTTCC
---GGGGATTTCC
 A C T G T A G C G T C A A C T G C T G A C A T G A C G T A G C T A G C T A G C T C G A T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCAGAGTTTTTCC
---GGGAATTTCC
 A C T G T A G C G T C A A C T G C T G A C A T G A C G T A G C T A G C T A G C T C G A T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GCAGAGTTTTTCC---
------ATTTTCCATT
 A C T G T A G C G T C A A C T G C T G A C A T G A C G T A G C T A G C T A G C T C G A T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCAGAGTTTTTCC
---GGGAATTTCC
 A C T G T A G C G T C A A C T G C T G A C A T G A C G T A G C T A G C T A G C T C G A T A G T C A G T C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCAGAGTTTTTCC-
--NGGGGATTTCCC
 A C T G T A G C G T C A A C T G C T G A C A T G A C G T A G C T A G C T A G C T C G A T A G T C A G T C A C G T
A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C